Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1807 |
Symbol | |
ID | 5390590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1589213 |
End bp | 1589851 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640862700 |
Product | HAD superfamily hydrolase |
Protein accession | YP_001398761 |
Protein GI | 153951264 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAGA TAAAAGCCAT TATTTTCGAT ATGGATGGAG TTTTGATTGA AGCTAAAGAT TGGCATTATG AAGCTTTAAA TAGAGCTTTA AAACTTTTTG GCATGGAAAT TACTAGATAT GAGCACTTAG CAACTTTTGA TGGCTTGCCA ACTAAGGATA AATTAAAAAT GCTTTCATTG GAAAGAGGGT TGCCTAAATC GCTACATTCT TTTATAAATG AATTAAAACA GCAATACACC ATGGAAATAG TTTATAGTTT ATGCAAACCT AGGTTTTATC ATGAATATGC TTTATCAAAG TTAAAATTTG AAGGTTATAA AATGGCTGTT TGTTCTAATT CTATACGCAA TAGCATTGAG GTAATGATGA AAAAATCGGC TCTTGAAAAT TATTTGGATT TTTATATTTC CAATGAAGAT GTAAAAAAAG GAAAACCTGA TCCTGAAATG TATATCAAAG CCATAGAAAG ATTAAAATTA AATCCTAAAG AATGCATGAT AGTGGAAGAT AATGAAAATG GTATAAAAGC AGCTAGGGCA AGTGGGGCTA ATGTGATGAT TGTAAGTGAG GTGAATGAAG TAAATTATGA AAATATTAAA AATCATATTT GTAAATTTGA AAAGGAATTG AAATGTTAA
|
Protein sequence | MTKIKAIIFD MDGVLIEAKD WHYEALNRAL KLFGMEITRY EHLATFDGLP TKDKLKMLSL ERGLPKSLHS FINELKQQYT MEIVYSLCKP RFYHEYALSK LKFEGYKMAV CSNSIRNSIE VMMKKSALEN YLDFYISNED VKKGKPDPEM YIKAIERLKL NPKECMIVED NENGIKAARA SGANVMIVSE VNEVNYENIK NHICKFEKEL KC
|
| |