Gene JJD26997_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1692 
SymbolcarB 
ID5388798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1492547 
End bp1495816 
Gene Length3270 bp 
Protein Length1089 aa 
Translation table11 
GC content34% 
IMG OID640862612 
Productcarbamoyl phosphate synthase large subunit 
Protein accessionYP_001398673 
Protein GI153951356 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) 
TIGRFAM ID[TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAC GAACAGATAT TAAAAGCATT TTACTTATAG GAAGTGGTCC TATAGTTATA 
GGACAAGCTT GTGAATTTGA TTATTCTGGA GCTCAAGCCG CAAAGACTTT AAAAGAATTA
GGATATCGTG TAGTATTAAT CAACTCAAAT CCTGCAACTA TTATGACAGA TCCTGAATTT
GCAGATGCAA CTTATATAGA ACCCATAACA AAAGAAAGTA TTTTAAGTAT TATTAAAAAA
GAAAAAATTG ATGCAATTTT ACCAACTATG GGTGGACAAG TAGCGTTAAA TGTTGCTATG
GAAGTTTATG AAAGCGGGCT TTTAGGAGAT GTGAAATTTT TAGGTGCCAA TCCTGAGGCG
ATTAAAAAAG GTGAAGATCG TCAGGTCTTT AAAGAATGTA TGAAAAAAAT CGGCATGGAT
TTGCCAAAAT CTATGTACGC GTATAATTAT GATGAAGCTT TAAAAGCCGT AGATGAAATC
GGCTTTCCTT TGATGATCCG TGCTTCTTAT ACTTTGGGGG GTGCTGGAAG TGGCGTGGTT
TATAATATGG ACGAATTTAA AGAACTTGCT AATACTGCTT TAGCTTTATC ACCTATTCAT
GAAATTTTGA TTGAAGAAAG TTTGTTAGGT TGGAAAGAAT ATGAAATGGA AGTTATACGT
GATAGAGCGG ATAATTGTAT CATAGTTTGT AGTATAGAAA ATATCGATCC TATGGGAGTT
CATACAGGAG ATAGTATTAC AATAGCTCCG GCATTAACTT TGACGGATAA AGAATATCAA
GCTATGCGTA ATGCTTCTTT TGCTATTTTG CGTGAAATTG GCGTAGATAC AGGCGGAAGT
AATGTGCAAT TTGCTATCAA CCCAAAAAAT GGAAGAATGA TAGTTATAGA AATGAATCCA
AGAGTTTCAA GATCAAGTGC TTTAGCTTCT AAGGCAACGG GTTATCCTAT AGCAAAGGTT
GCGACACTTT TGGCAGTAGG CTTTAGCTTA GATGAGATTA AAAATGATAT TACAGGAACT
CCTGCATCTT TTGAGCCTGT GATTGATTAT ATTGTAACAA AAATTCCTCG CTTTACTTTT
GAAAAATTTC CAGGAGCAAA CACAACTTTA GGCACAGCTA TGAAAAGTGT GGGCGAGGTA
ATGGCTATAG GACGCACTTT TAAAGAAAGT ATACAAAAAG CACTTTGTTC TCTTGAGCGT
TCTTTAAGTG GTTTTGATAG GGTAAAATTT GAAGATAGAA ATGATCTTGT TTTTAAAATT
CGCAATGCCA ATGAAAAGCG TTTGCTTTAT GTTGCCCAAG CTTTTAGGGA AGGTTTTAGC
GTAGAAGAAC TTTATGAGCT TTGTAAAATA GATCCTTGGT TTTTAACACA GATTAAAGAA
ATTGTAGATT TTGAAGAGCA AATTGATATG GATATTTTAA ACAATAAAGC TCTTTTGAGA
AAAGCAAAAA CTATGGGCTT TTCAGATAAA ATGATAGCCT TGCTTGTAAA TTTGAAAGAT
AATTTAGAAT TAAGCCAAAA TGATATTTAT TATGCGAGAA TGAAGCAAAA AATCATCGCA
GAATTTAGCG AAGTGGATAC TTGTGCGGGT GAATTTGAAG CTTTAACTCC TTATCTTTAT
TCAAGTATTA ATGTAAGCGA ACTCACTCAA AGTAAAAATG ATGCTAAGGA TAAAAAAGAA
AAAAAAGTTA TGATTATAGG CGGGGGACCA AACCGTATAG GACAAGGTAT AGAATTTGAC
TATGCTTGTG TACATGCTTC TTTTGCGCTT AAAGATATGG GTATTAAAAC CATTATGTAT
AATTGCAATC CTGAAACCGT TTCGACTGAC TATGATACAA GTGATATTTT GTATTTCGAA
CCTATTGATT TTGAACATTT AAGAGCGGTG ATTGAGCGTG AAAAACCTGA TGGAGTGATT
GTGCATTTTG GTGGACAAAC TCCTTTGAAA TTTGCTAAGC GTTTAAGTGC TTTTGAAGCT
AAGATTATAG GTACTAGTGC AAGAGTAATT GATATGGCAG AAGATAGAAA GAAATTTGCT
GAATTTATTA CAAAGTTAGG TATCAATCAG CCAAAAAATT CTACTGCAAC AAGTATCGAA
GAAGCGGTAT TTAAGGCTAG TGATATAGAA TATCCTGTGC TTGTAAGACC AAGTTATGTT
TTAGGTGGGC GTGCGATGCG CGTGGTAAAT GATGAGGCTG AACTTAGACT TTATATGCAA
GAAGCTGTGG ATGTGAGTGA TAAAAGTCCT GTTTTGATTG ATCAGTTTTT AGATAATGCT
ACAGAAATTG ATGTTGATGC GATTTGTGAT GGCAAAGATG TTTATGTAGC AGGAATTATG
GAGCATATAG AAGAAGCGGG AATCCATTCA GGTGACAGTG CTTGTTCTTT ACCACCTTGC
AATATCGATG AAAAAATGCA AGAATTTATT GCACAAAAAA CCGCAGATAT TGCTTTAAAT
TTAGGAGTTG TAGGGCTTTT AAATATACAA TTTGCTTTAC ATAATAATGA GCTTTATATG
ATAGAAGTAA ATCCTAGAGC TAGTCGTACT GTGCCTTTTG TTAGTAAAGC TACGGGTATT
CCTTTGGCAA AAGTGGCAAC GCGTGTGATG TGGCAAGGAA ATTTAAAAGA GGCTTTAAAA
TTTTATGATA CTTTCAAAGT GGTTAATTTT GATACTAAAA TTTTACGCCC TAAAACTCCA
AAATATATGA GTGTGAAAGA AGCAGTATTT CCATTTGCAA AACTTAGCGG AAGTGATTTA
GAATTAGGCC CTGAAATGCG TTCAACGGGT GAAGTTATGG GTATAAGTAA GGATTTTGCA
AATTCTTATG CAAAAAGTCA AATCGCATCG TTTAATCATC TTCCAGAACA AGGTGTGGTA
TTTATCTCCT TAAAAGATAA GGATAAAAAA TATACTAAAA AAATCGCTGC AGAATATGTA
AAGCTTGGCT TTAAGCTTAT GGCAACTGGG GGAACTTGCA AGGAAATTTT AGAAAGTGGT
TTTGAGTGTG AGCTTGTGCA TAAAATTTCA GAAGGGCGCC CAAATGTCGA AGATAAATTG
AAAAATGGGG AAATTCACTT AGTTATCAAT ACAAGCGATA GTCACAGTTT TAAAGGTGAT
ACGAAAAAAA TTCGTGAAAA TATCATTCGT TTTAAAATAC CTTATTTTAC AAATTTACGC
TCAGCTTTAG CAGGTGCAAA ATCGATTAAA GCTATACAGA GTAAATCTTG CCTAGATGTA
AAGAGTTTGC AAGAGTGGCT TAAAATTTGA
 
Protein sequence
MPKRTDIKSI LLIGSGPIVI GQACEFDYSG AQAAKTLKEL GYRVVLINSN PATIMTDPEF 
ADATYIEPIT KESILSIIKK EKIDAILPTM GGQVALNVAM EVYESGLLGD VKFLGANPEA
IKKGEDRQVF KECMKKIGMD LPKSMYAYNY DEALKAVDEI GFPLMIRASY TLGGAGSGVV
YNMDEFKELA NTALALSPIH EILIEESLLG WKEYEMEVIR DRADNCIIVC SIENIDPMGV
HTGDSITIAP ALTLTDKEYQ AMRNASFAIL REIGVDTGGS NVQFAINPKN GRMIVIEMNP
RVSRSSALAS KATGYPIAKV ATLLAVGFSL DEIKNDITGT PASFEPVIDY IVTKIPRFTF
EKFPGANTTL GTAMKSVGEV MAIGRTFKES IQKALCSLER SLSGFDRVKF EDRNDLVFKI
RNANEKRLLY VAQAFREGFS VEELYELCKI DPWFLTQIKE IVDFEEQIDM DILNNKALLR
KAKTMGFSDK MIALLVNLKD NLELSQNDIY YARMKQKIIA EFSEVDTCAG EFEALTPYLY
SSINVSELTQ SKNDAKDKKE KKVMIIGGGP NRIGQGIEFD YACVHASFAL KDMGIKTIMY
NCNPETVSTD YDTSDILYFE PIDFEHLRAV IEREKPDGVI VHFGGQTPLK FAKRLSAFEA
KIIGTSARVI DMAEDRKKFA EFITKLGINQ PKNSTATSIE EAVFKASDIE YPVLVRPSYV
LGGRAMRVVN DEAELRLYMQ EAVDVSDKSP VLIDQFLDNA TEIDVDAICD GKDVYVAGIM
EHIEEAGIHS GDSACSLPPC NIDEKMQEFI AQKTADIALN LGVVGLLNIQ FALHNNELYM
IEVNPRASRT VPFVSKATGI PLAKVATRVM WQGNLKEALK FYDTFKVVNF DTKILRPKTP
KYMSVKEAVF PFAKLSGSDL ELGPEMRSTG EVMGISKDFA NSYAKSQIAS FNHLPEQGVV
FISLKDKDKK YTKKIAAEYV KLGFKLMATG GTCKEILESG FECELVHKIS EGRPNVEDKL
KNGEIHLVIN TSDSHSFKGD TKKIRENIIR FKIPYFTNLR SALAGAKSIK AIQSKSCLDV
KSLQEWLKI