Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1692 |
Symbol | carB |
ID | 5388798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1492547 |
End bp | 1495816 |
Gene Length | 3270 bp |
Protein Length | 1089 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640862612 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_001398673 |
Protein GI | 153951356 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAAAC GAACAGATAT TAAAAGCATT TTACTTATAG GAAGTGGTCC TATAGTTATA GGACAAGCTT GTGAATTTGA TTATTCTGGA GCTCAAGCCG CAAAGACTTT AAAAGAATTA GGATATCGTG TAGTATTAAT CAACTCAAAT CCTGCAACTA TTATGACAGA TCCTGAATTT GCAGATGCAA CTTATATAGA ACCCATAACA AAAGAAAGTA TTTTAAGTAT TATTAAAAAA GAAAAAATTG ATGCAATTTT ACCAACTATG GGTGGACAAG TAGCGTTAAA TGTTGCTATG GAAGTTTATG AAAGCGGGCT TTTAGGAGAT GTGAAATTTT TAGGTGCCAA TCCTGAGGCG ATTAAAAAAG GTGAAGATCG TCAGGTCTTT AAAGAATGTA TGAAAAAAAT CGGCATGGAT TTGCCAAAAT CTATGTACGC GTATAATTAT GATGAAGCTT TAAAAGCCGT AGATGAAATC GGCTTTCCTT TGATGATCCG TGCTTCTTAT ACTTTGGGGG GTGCTGGAAG TGGCGTGGTT TATAATATGG ACGAATTTAA AGAACTTGCT AATACTGCTT TAGCTTTATC ACCTATTCAT GAAATTTTGA TTGAAGAAAG TTTGTTAGGT TGGAAAGAAT ATGAAATGGA AGTTATACGT GATAGAGCGG ATAATTGTAT CATAGTTTGT AGTATAGAAA ATATCGATCC TATGGGAGTT CATACAGGAG ATAGTATTAC AATAGCTCCG GCATTAACTT TGACGGATAA AGAATATCAA GCTATGCGTA ATGCTTCTTT TGCTATTTTG CGTGAAATTG GCGTAGATAC AGGCGGAAGT AATGTGCAAT TTGCTATCAA CCCAAAAAAT GGAAGAATGA TAGTTATAGA AATGAATCCA AGAGTTTCAA GATCAAGTGC TTTAGCTTCT AAGGCAACGG GTTATCCTAT AGCAAAGGTT GCGACACTTT TGGCAGTAGG CTTTAGCTTA GATGAGATTA AAAATGATAT TACAGGAACT CCTGCATCTT TTGAGCCTGT GATTGATTAT ATTGTAACAA AAATTCCTCG CTTTACTTTT GAAAAATTTC CAGGAGCAAA CACAACTTTA GGCACAGCTA TGAAAAGTGT GGGCGAGGTA ATGGCTATAG GACGCACTTT TAAAGAAAGT ATACAAAAAG CACTTTGTTC TCTTGAGCGT TCTTTAAGTG GTTTTGATAG GGTAAAATTT GAAGATAGAA ATGATCTTGT TTTTAAAATT CGCAATGCCA ATGAAAAGCG TTTGCTTTAT GTTGCCCAAG CTTTTAGGGA AGGTTTTAGC GTAGAAGAAC TTTATGAGCT TTGTAAAATA GATCCTTGGT TTTTAACACA GATTAAAGAA ATTGTAGATT TTGAAGAGCA AATTGATATG GATATTTTAA ACAATAAAGC TCTTTTGAGA AAAGCAAAAA CTATGGGCTT TTCAGATAAA ATGATAGCCT TGCTTGTAAA TTTGAAAGAT AATTTAGAAT TAAGCCAAAA TGATATTTAT TATGCGAGAA TGAAGCAAAA AATCATCGCA GAATTTAGCG AAGTGGATAC TTGTGCGGGT GAATTTGAAG CTTTAACTCC TTATCTTTAT TCAAGTATTA ATGTAAGCGA ACTCACTCAA AGTAAAAATG ATGCTAAGGA TAAAAAAGAA AAAAAAGTTA TGATTATAGG CGGGGGACCA AACCGTATAG GACAAGGTAT AGAATTTGAC TATGCTTGTG TACATGCTTC TTTTGCGCTT AAAGATATGG GTATTAAAAC CATTATGTAT AATTGCAATC CTGAAACCGT TTCGACTGAC TATGATACAA GTGATATTTT GTATTTCGAA CCTATTGATT TTGAACATTT AAGAGCGGTG ATTGAGCGTG AAAAACCTGA TGGAGTGATT GTGCATTTTG GTGGACAAAC TCCTTTGAAA TTTGCTAAGC GTTTAAGTGC TTTTGAAGCT AAGATTATAG GTACTAGTGC AAGAGTAATT GATATGGCAG AAGATAGAAA GAAATTTGCT GAATTTATTA CAAAGTTAGG TATCAATCAG CCAAAAAATT CTACTGCAAC AAGTATCGAA GAAGCGGTAT TTAAGGCTAG TGATATAGAA TATCCTGTGC TTGTAAGACC AAGTTATGTT TTAGGTGGGC GTGCGATGCG CGTGGTAAAT GATGAGGCTG AACTTAGACT TTATATGCAA GAAGCTGTGG ATGTGAGTGA TAAAAGTCCT GTTTTGATTG ATCAGTTTTT AGATAATGCT ACAGAAATTG ATGTTGATGC GATTTGTGAT GGCAAAGATG TTTATGTAGC AGGAATTATG GAGCATATAG AAGAAGCGGG AATCCATTCA GGTGACAGTG CTTGTTCTTT ACCACCTTGC AATATCGATG AAAAAATGCA AGAATTTATT GCACAAAAAA CCGCAGATAT TGCTTTAAAT TTAGGAGTTG TAGGGCTTTT AAATATACAA TTTGCTTTAC ATAATAATGA GCTTTATATG ATAGAAGTAA ATCCTAGAGC TAGTCGTACT GTGCCTTTTG TTAGTAAAGC TACGGGTATT CCTTTGGCAA AAGTGGCAAC GCGTGTGATG TGGCAAGGAA ATTTAAAAGA GGCTTTAAAA TTTTATGATA CTTTCAAAGT GGTTAATTTT GATACTAAAA TTTTACGCCC TAAAACTCCA AAATATATGA GTGTGAAAGA AGCAGTATTT CCATTTGCAA AACTTAGCGG AAGTGATTTA GAATTAGGCC CTGAAATGCG TTCAACGGGT GAAGTTATGG GTATAAGTAA GGATTTTGCA AATTCTTATG CAAAAAGTCA AATCGCATCG TTTAATCATC TTCCAGAACA AGGTGTGGTA TTTATCTCCT TAAAAGATAA GGATAAAAAA TATACTAAAA AAATCGCTGC AGAATATGTA AAGCTTGGCT TTAAGCTTAT GGCAACTGGG GGAACTTGCA AGGAAATTTT AGAAAGTGGT TTTGAGTGTG AGCTTGTGCA TAAAATTTCA GAAGGGCGCC CAAATGTCGA AGATAAATTG AAAAATGGGG AAATTCACTT AGTTATCAAT ACAAGCGATA GTCACAGTTT TAAAGGTGAT ACGAAAAAAA TTCGTGAAAA TATCATTCGT TTTAAAATAC CTTATTTTAC AAATTTACGC TCAGCTTTAG CAGGTGCAAA ATCGATTAAA GCTATACAGA GTAAATCTTG CCTAGATGTA AAGAGTTTGC AAGAGTGGCT TAAAATTTGA
|
Protein sequence | MPKRTDIKSI LLIGSGPIVI GQACEFDYSG AQAAKTLKEL GYRVVLINSN PATIMTDPEF ADATYIEPIT KESILSIIKK EKIDAILPTM GGQVALNVAM EVYESGLLGD VKFLGANPEA IKKGEDRQVF KECMKKIGMD LPKSMYAYNY DEALKAVDEI GFPLMIRASY TLGGAGSGVV YNMDEFKELA NTALALSPIH EILIEESLLG WKEYEMEVIR DRADNCIIVC SIENIDPMGV HTGDSITIAP ALTLTDKEYQ AMRNASFAIL REIGVDTGGS NVQFAINPKN GRMIVIEMNP RVSRSSALAS KATGYPIAKV ATLLAVGFSL DEIKNDITGT PASFEPVIDY IVTKIPRFTF EKFPGANTTL GTAMKSVGEV MAIGRTFKES IQKALCSLER SLSGFDRVKF EDRNDLVFKI RNANEKRLLY VAQAFREGFS VEELYELCKI DPWFLTQIKE IVDFEEQIDM DILNNKALLR KAKTMGFSDK MIALLVNLKD NLELSQNDIY YARMKQKIIA EFSEVDTCAG EFEALTPYLY SSINVSELTQ SKNDAKDKKE KKVMIIGGGP NRIGQGIEFD YACVHASFAL KDMGIKTIMY NCNPETVSTD YDTSDILYFE PIDFEHLRAV IEREKPDGVI VHFGGQTPLK FAKRLSAFEA KIIGTSARVI DMAEDRKKFA EFITKLGINQ PKNSTATSIE EAVFKASDIE YPVLVRPSYV LGGRAMRVVN DEAELRLYMQ EAVDVSDKSP VLIDQFLDNA TEIDVDAICD GKDVYVAGIM EHIEEAGIHS GDSACSLPPC NIDEKMQEFI AQKTADIALN LGVVGLLNIQ FALHNNELYM IEVNPRASRT VPFVSKATGI PLAKVATRVM WQGNLKEALK FYDTFKVVNF DTKILRPKTP KYMSVKEAVF PFAKLSGSDL ELGPEMRSTG EVMGISKDFA NSYAKSQIAS FNHLPEQGVV FISLKDKDKK YTKKIAAEYV KLGFKLMATG GTCKEILESG FECELVHKIS EGRPNVEDKL KNGEIHLVIN TSDSHSFKGD TKKIRENIIR FKIPYFTNLR SALAGAKSIK AIQSKSCLDV KSLQEWLKI
|
| |