| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1434 |
|---|
| Symbol | ybbB |
|---|
| ID | 5390209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1273907 |
|---|
| End bp | 1274905 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640862394 |
|---|
| Product | tRNA 2-selenouridine synthase |
|---|
| Protein accession | YP_001398468 |
|---|
| Protein GI | 153951307 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2603] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.719494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTG AAGTTGAATT TGCAGAGTTT CAAAAAGAAA ATTTCTCTCT TTTAATCGAT
GCAAGAAGCC CTAGAGAATT TTTGCATTCT CATTTGATAG GAGCTTTAAA TTTTTATGCA
CTCAATGATG AAGAATATCA AGAAATAGGA ACGATTTATA AGAAAAATCA AGCCCTAGCC
AAGGCTAGGG GTGCGAGTTA TATTTGTCAA AATACCGCTA AGCATATATT AGAAATCACC
CAAAATTTTC GCATAGGAGA AAAGGTGGGG ATTTATTGTT CTCGCGGGGG TTTGCGTTCA
AAGTCTATCG CAGTGATTTT AAGCGAGCTT GGTTTTAGAG TGGTGCGTTT AAAAGGTGGA
TTTAAAGCTT ATAGAACTTT TGTAACGCAT TATTTTGAGA ATGAAATAAA TTTTGATTTT
TTTGCTCTTT GTGGCAATAC AGGCTGTGGA AAAACAGAGC TTTTAGAACA ACTCCCACAA
GCTATAAATT TGGAAAAAAT GGCAAATCAT CTAGGCTCGT CTTTTGGCGA TATTTTAGGA
AAACAACCTA CGCAAAAAGC TTTTGAAGCA GAACTTTTTC ACAATATGCG AAATTCAGAA
AATTTTGCTT TCATAGAAAG TGAAAGTCGC AAAATAGGGG ATATCATCTT ACCTTTGAAA
TTTTATGAAA AAATACAAAG GGCTTTTAAA ATTTATTGTT TTTGTTCTTT GGAAAATCGT
GTTAAAAGAA TACAAAAAAT TTATCAAGAG AAAATGACTC CTTTAAAATT TCAACAATGT
GTGCAAAAAA TCAGCCCTTA TATCAGCTTA AATTTACGCC AAGATTTGCT TCAAAGTTAT
GAGAGAAAAG AATGGCAAAG GCTTATTATT ATGCTTTTGG AGTATTATGA TAAAACTTAT
AAAAAACCAG ATAAGATTGA TCTTGAGTTA AATACTGATG ATATTTTAAA AGCTAAAGAA
GAGCTTTTAG ATCATTTTAA AGCGCAATTA CTTTTTTAA
|
|---|
| Protein sequence | MLSEVEFAEF QKENFSLLID ARSPREFLHS HLIGALNFYA LNDEEYQEIG TIYKKNQALA
KARGASYICQ NTAKHILEIT QNFRIGEKVG IYCSRGGLRS KSIAVILSEL GFRVVRLKGG
FKAYRTFVTH YFENEINFDF FALCGNTGCG KTELLEQLPQ AINLEKMANH LGSSFGDILG
KQPTQKAFEA ELFHNMRNSE NFAFIESESR KIGDIILPLK FYEKIQRAFK IYCFCSLENR
VKRIQKIYQE KMTPLKFQQC VQKISPYISL NLRQDLLQSY ERKEWQRLII MLLEYYDKTY
KKPDKIDLEL NTDDILKAKE ELLDHFKAQL LF
|
|---|
| |