Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1427 |
Symbol | |
ID | 5389474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1265531 |
End bp | 1267462 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640862387 |
Product | penicillin-binding protein 1A |
Protein accession | YP_001398461 |
Protein GI | 153952250 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT TAAAATATAT TTTTTCATTT TTTACTCTTT TGCTTATAGC TGGATTTATT TATGTGGCTT ATCTTTTCAC AAGTGCTGAT ACTGAGGGCT ATACTTTTAA AGAATACAAA CCTCCTCTTA CAACACAAAT TTACGATAGA AATGGCAAGC TTGTGGCTAA TATTTTTGAA CAGCATCGTT TTTATGCTTC TTATGAAGAG CTTCCTCCAC GCCTTATAGA AGCTTTGGTT GCTATAGAAG ATACAAGCTT TTTTGAACAT AATGGAGTTA ATATCGATGC TATTTTTAGA GCCGCTGTAA AAATCATAAA AAGCGGTGGA AAAACCATGG AAGGAGCTTC CACCCTTACC CAGCAATTTA TTAAAAATAC GGAATTAACC CCAGAAAGAA CTATTACGCG TAAAATTCGA GAAGCTTTGC TTGCTTATAA AATGGAAACC ATTTTGACTA AAGAGCAAAT TTTAGAAAGG TATTTAAATT TTATCTTTTT TGGACATGGG TATTATGGAG TAAAAACCGC AGCTTCAGGA TATTTTCATA AAAATTTAAA TGAATTAAGC TTTAAAGAGA TTGCTATGCT AGTGGGTATG CCAAAAGCAC CTAGTAGTTA TGATCCTACA AAACATTTAG ATCTTTCCAT CTCAAGAGCA AATAATGTTA TTTCAAGAAT GTATAGTCTA GGTTGGATTT CAAAAGCAGA TTATGATATA GCCATTAAAG AAATTCCACA AGTTTATGAT GATACACTCA CTCAAAATGC CGCTCCTTAT GTTGTAGATG AAGTGATTAA ACAATTAAGC CCTAGTATTA AAGACTTAAA AACAGGTGGA TATAAAATCA TTTTAAATAT AGACTTAGAT GTTCAAAATA TGGCGCAAAA TGCTTTAAAA TTTGGTTATA ATGAGATAGT AAAACGCGAT AAAGATGCAA ATTTAAGCAC TTTAAACGGA GCTATGGTCG TGGTAAATCA TCAAAGTGGA GATGTTTTAG CTTTGGTAGG TGGGGTTGAT TATGAAAAAA GTAATTATAA CCGCGCTACT CAAAGTATGC GTCAACCTGG AAGCTCTTTT AAACCTTTTG TGTATCAAGT GGCGATTAAT TTAGGATATT CGCCTATGAG TGAAATTGCT GATATTTCTA GAATTTTTGA AGGTGGAGCG GGTAATAATG AAGATTGGAA GCCTAAAAAT GAAGGGGATA AATTTTTAGG TTTAATTACC TTAAAAGAAG CTTTAACAAG ATCAAGAAAT TTAGCTACCA TTAATCTTGC ACTTGATATG GGACTTGATG TTCTTTACTC TAAACTAATG GAATTTGGAT TTAAAGATAT ACCGCCTAAT TTATCAATCG TATTGGGAAG TTTTGGTATT TCTCCTTTGG AGTATTCGAA ATTTTATACC ATGTTTGGGA ACTATGGTGC GATTAAAAAT CCTCAAATTA TCAGACAAGT TCAGGATAAA ACCGGTAAAA TCATCATGGA ATTTAACTCA AATGAGCGCA AAGTCAGTGA TGAAGCACAA ATTTTTTTAG TTTTAGATAT GATGAGAAAT GTTGTTGAGA AAGGCACAGG GCGTCATGCA AGAGTAAAAG ATATAGAAAT AGCAGGAAAA ACAGGAACAA CGAATAAAAG TGTTGATGCT TGGTTTTGTG GATTTACACC TGAAATAGAA GCAATCATTT GGTATGGAAA TGATAATAAC AAGCCTATGC GTTATACAGA AGGTGGAGCT AGAACGGCTG CTCCTGTGTT TAGAGAATTT TTAACTCAAT ATATAGAAAA ATTCCCTGAT ACAACTAGAA AATTTAGCAT TCCTGATGGA GTTTATCGCG GAAATTATAA AGGAGAAAGT GCTTATTATA CCACCAAATC ACCATTACCA AAAGCAAATA TGAAATTTAA TGAAAGTGAG ATTATATTTT GA
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Protein sequence | MKILKYIFSF FTLLLIAGFI YVAYLFTSAD TEGYTFKEYK PPLTTQIYDR NGKLVANIFE QHRFYASYEE LPPRLIEALV AIEDTSFFEH NGVNIDAIFR AAVKIIKSGG KTMEGASTLT QQFIKNTELT PERTITRKIR EALLAYKMET ILTKEQILER YLNFIFFGHG YYGVKTAASG YFHKNLNELS FKEIAMLVGM PKAPSSYDPT KHLDLSISRA NNVISRMYSL GWISKADYDI AIKEIPQVYD DTLTQNAAPY VVDEVIKQLS PSIKDLKTGG YKIILNIDLD VQNMAQNALK FGYNEIVKRD KDANLSTLNG AMVVVNHQSG DVLALVGGVD YEKSNYNRAT QSMRQPGSSF KPFVYQVAIN LGYSPMSEIA DISRIFEGGA GNNEDWKPKN EGDKFLGLIT LKEALTRSRN LATINLALDM GLDVLYSKLM EFGFKDIPPN LSIVLGSFGI SPLEYSKFYT MFGNYGAIKN PQIIRQVQDK TGKIIMEFNS NERKVSDEAQ IFLVLDMMRN VVEKGTGRHA RVKDIEIAGK TGTTNKSVDA WFCGFTPEIE AIIWYGNDNN KPMRYTEGGA RTAAPVFREF LTQYIEKFPD TTRKFSIPDG VYRGNYKGES AYYTTKSPLP KANMKFNESE IIF
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