| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1399 |
|---|
| Symbol | icd |
|---|
| ID | 5388967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1239663 |
|---|
| End bp | 1241966 |
|---|
| Gene Length | 2304 bp |
|---|
| Protein Length | 767 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640862367 |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_001398441 |
|---|
| Protein GI | 153951562 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACTA AAACAAACTT TAAACTTACT CTTGCATTTT TTTTTATTTG TAATATACTT
AAAAATGAAA ATAAAAATAA GTATTTTAAA GGACTAAAAA TGCAAATTAC TTATACCTTG
ACAGATGAGT CACCAGCACT TGCTACTTAT TCGTTTTTGC CTATAGTGAA AGCTTTTTTA
AGTAGGGCAC ATATAGGAGT AAAAACCTCA GATATTTCTT TATCCGGGAG AATTTTAGCT
ACTTTTAGTG AGTATTTAAA AGAGGAACAA AGATGCGAAG ATGCTTTAGA GCTTTTAGGT
GAGCTTGTAA AAAGATCGGA TGCAAATCTT ATTAAAACCC CAAATATTTC GGCTTCTATT
CCTCAGCTTA AGGCAGCCAT TAAAGAATTG CAAGATAAAG GTTATATGTT ACCAAACTAC
CCAGATGAGC CAAAAAATGA TGAAGAATTG CAAATTAAAA CAAAATATCA AAAAGTTTTA
GGTTCAGCGG TTAATCCTGT ATTAAGACAA GGAAATTCAG ATCGTCGTTC AACAAAAGCG
GTAAAAGACT ATGCAAAAAA CAATCCCTAT CGTGTGGTTG AGTTTAATCC AAACTCAAAA
ACTCGTGTTT CTTACATGAA AGAAGGAGAT TTTTTCTCTA ACGAAAAAGC GGTTTTAATC
GATCAAAATT GTGTGGCTAA TATAGAATTT ACAAGTATTG ATGGTAAAAA TGAAATTTTA
AAAGAGGGTT TAAAACTTGA AAAAAATGAA ATTTTAGACG CTACTTTTAT GGATGTAGAG
AAGCTTCAGG AATTTTATGC AAAAGAAATT AAAGCAAGTA AAGATGATGA TGTGCTTTTT
TCTTTGCATT TAAAAGCTAC AATGATGAAA GTAAGCGATC CTATACTTTT TGGTTATGCG
GTAAAAGTAT TTTTTAAGGA ATTATTTATC GAATTTCAAG ATGAATTTGA AAAATTAGGT
ATTAATCCAA ATAATGGTTT AAGCGAGCTT TTAAGTAAAA TCGAAAATTC AAGTAAAAAA
GATGAAATTC TAAAAAAATA CAATGAAATT TTAGCTAAAT CTACAGATAT TTCTATGGTA
AATTCAGATA AAGGTATTAC AAATCTCCAT GTTCCAAGTG ATGTTATTGT TGATGCTTCT
ATGCCTGCAA TGCTTAAAAA TGGCGCAAGA TTGTGGGATA AGAAAGGTAG GGAAAAAGAT
ACAAATGCCG TAATTCCTGA TCAAACTTAC GCAACTATTT ATGAGGCGGT TATTGAAGAT
TTGCATAAAA ATGGCACTTT AAATCCTTCA AAACTTGGCA GTGTATCTAA TGTAGGTTTA
ATGGCTAAAA AAGCTCAAGA ATATGGCTCG CACGATAAAA CCTTTGTGGC TAAAGAAGAG
GGAACTTTTA AAATAGTTTC TAATGGTAAA GTTTTATTAG AACATAAGGT TAGAAAAGGT
GATATTTATA GAGCCAATCA GGCTAAATTT GATGCCGTGC TAAATTGGAT TGATTTAGGC
GTAGAAAGAT CAGAACTTAG CGGAGCTGAA GCTATTTTTT GGTTGGATAG CAAAAGAGCT
AGTAATAAAA TCATGATAAC TTTGGTGCAA AATCGTTTAA AAGAAAAGGG TAAAAATATA
GCCATTTTAG CTCCAAAAGA AGCTTGCTTA AGAAGCTTGG AGTTAATCCG AGAGGGCAAG
GATGTTATTT CTATCACGGG CAATGTTTTA AGGGATTATT TAACCGATCT TTTTCCTATT
TTAGAACTTG GAACAAGTGC AAAAATGCTT TCTGTTGTGC CTATGTTAAA TGGTGGTGCT
ATGTTTGAAA CAGGAGCAGG GGGTTCAGCA CCTAAACAAG TAGAACAATT AGTCGAAGAA
AATCATCTGC GTTGGGATAG TTTGGGTGAA TTTTTGGCTT TGCAAGCAAG TTTGGAATTT
TATGCAAATA AGTGTAGCAA TCATAAAGCT AAGGTTTTAG CAGAATGTCT TGATGAAGCT
ATAGGTGAAT GGCTTGAAAA TAATAAAGCT CCATCAAGAA AAGTTAAAGA AGATGACAAT
AGGACAAGTC ATTTTTACTT AGCAATGTAT TTTGCAAATC ATTTAGCAAG GCAGGCAAGT
GATATGGAGT TTCAAAGCTT TTTTAAAGAT ATTGCCCTAG AACTTTCTTC TAATGAAGAA
AAAATCAGAG CCGAATTTAA TGATGCGCAA GGTGTGAAAG TGGATTTGGG TGGGTATTAT
AAATTTGATG ATGAAAAAGC AAATCAAATC ATGCGTCCAA GTGTAACTTT TAATGCTATT
TTAGAAAAAA TAGGACAAAA ATGA
|
|---|
| Protein sequence | MKTKTNFKLT LAFFFICNIL KNENKNKYFK GLKMQITYTL TDESPALATY SFLPIVKAFL
SRAHIGVKTS DISLSGRILA TFSEYLKEEQ RCEDALELLG ELVKRSDANL IKTPNISASI
PQLKAAIKEL QDKGYMLPNY PDEPKNDEEL QIKTKYQKVL GSAVNPVLRQ GNSDRRSTKA
VKDYAKNNPY RVVEFNPNSK TRVSYMKEGD FFSNEKAVLI DQNCVANIEF TSIDGKNEIL
KEGLKLEKNE ILDATFMDVE KLQEFYAKEI KASKDDDVLF SLHLKATMMK VSDPILFGYA
VKVFFKELFI EFQDEFEKLG INPNNGLSEL LSKIENSSKK DEILKKYNEI LAKSTDISMV
NSDKGITNLH VPSDVIVDAS MPAMLKNGAR LWDKKGREKD TNAVIPDQTY ATIYEAVIED
LHKNGTLNPS KLGSVSNVGL MAKKAQEYGS HDKTFVAKEE GTFKIVSNGK VLLEHKVRKG
DIYRANQAKF DAVLNWIDLG VERSELSGAE AIFWLDSKRA SNKIMITLVQ NRLKEKGKNI
AILAPKEACL RSLELIREGK DVISITGNVL RDYLTDLFPI LELGTSAKML SVVPMLNGGA
MFETGAGGSA PKQVEQLVEE NHLRWDSLGE FLALQASLEF YANKCSNHKA KVLAECLDEA
IGEWLENNKA PSRKVKEDDN RTSHFYLAMY FANHLARQAS DMEFQSFFKD IALELSSNEE
KIRAEFNDAQ GVKVDLGGYY KFDDEKANQI MRPSVTFNAI LEKIGQK
|
|---|
| |