| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0623 |
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| Symbol | pepF |
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| ID | 5390499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 562061 |
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| End bp | 563782 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640861694 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_001397788 |
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| Protein GI | 153951528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAT GGGATTTAAG CGCTTTATTT CACGATAAAG AAGCATTGCA AAATTTTACA
CAAGATCAAA TCCAACAAAG TTTAAATTTC AAAAAAAACT ATGAAAATAA ACTTTATGCA
TTAAATGCTA ATGAGTTTTT GCAAGCTTTA AAAGATTATG AACATTTAAA TCAAGCTCTT
GGCAAAATCA TGACTTATGC TTATTTGCTT TTTGCTAAAA ACACTCAAAA TGGTTCTTTT
TATGCACAAT ACGAAGAAGA ATGCAAAAAA ATAGAAGAAA ATTTACTCTT TTTCGAGCTT
GAATTTTGCG AGTTAGCTCC TGAGAAAAGT CAAGAATTTA CAACTTTTTG CAAAGATTAT
GATTTTTATC TTTCTAATTT ATTGCAAAAC AAACGCTACA ATCTTAGCAA AAACGAAGAA
CGCATTATAC TTTATCTTTC AAATACAGGT GCAAATGCTT TTAGTAGACT TTTTGATGAA
AGTATGAGTG CTTTAAAAAT CCCTTTTAAA GGTAAAAAAC TTAGCGAAGA AGAAATTCTA
AGCAAAATGT ATGATGAAGA TAGAAAGATA CGCAAAAAAG CTGCTAAAAA ATTCAGTAAA
GTTTTGCAAA AAAATAGCAG ACTTTTAAGT TTTATTATCA ATATGATAAA AACAGAAAGA
AAAAACATAA GCTTATTAAG AGGTTATGAA AATGCTGAAA TTTCAAGACA TATCAGCAAT
CAAATTTCGC AAAAAAGCGT TGATTCCTTG ATAGCAAGTG CGCAAAAACA TTTTGACTTA
GTATCGCAAT TTTACAAAAG AAAAAAACAA ATTTTAGGCT ATGATGAGCT TAAAGACTAT
GACAGATATG CGCCCATAGG AAAAGAAGCG AGTTTTGATT TTAAAACAAG CAAAAATATT
GTTTTAGAAG CATTTCAAGC TTTTTCTCCA CAATTTTATG ATATAGCAAA AAATGCTTTT
GATCAAGGCT GGATTGATGT TTATCCGCAA GAAAATAAAC AAGGGGGTGC TTTTTCACAT
TCTGCAACTT CTGATGCGCA TCCTTTTGTT TTATTAAACT ACACCGACAA AAGACGCGAT
CTTTTTACGC TTGCACATGA ATTAGGACAC ACTATCCATC AAAAACTTTC TTATAATGTA
AGCTATCTAA ATCAAAATAC GCCTCTAACC ACTGCAGAAA CAGCTTCAGT TTTTGCTGAA
ATGCTAGTAT TTGATTTTAC TAAAGATAAA CTAAAAAAAG AAGAACTCTT ATCTTTATAT
GCAAACAAAA TCGAAGATAT TTTTGCAACT TTTTATAGAC AAATTAATTT TACTTGTTTT
GAAAGACGCT TACATGCTCA AGAAAATGAA CTTAACACCG AAGAAATCAA TAAAATTTGG
ATGGAAGAAT CTCAAAAGAT GTTTCAAGAT AGTGTAAAAC TTACAAAAAA TTATGCTTCT
TGGTGGAGTT ATATTCCTCA CTTTATCCAT TCTCCTTTTT ATTGCTATGC TTATGCTTAT
GCACAACTTT TAGTTTTAGC TCTTTATGGA CTTTACAAAA GTAAAAAATG TGAAAATTTT
AAAGAACTTT ATATCAAAAT GCTTTCTTTA GGCGGAAGTG TGAGTCCAAA GGAACTAGTA
GGAATGTTTG GCTTTGATAT AGAAGATGAA AATTTTTGGG AAATAGGCAT AAAAGAAATT
CAAAAACTCA TCAATGAATT TATGGAGTTA CAATCATGCT AG
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| Protein sequence | MLEWDLSALF HDKEALQNFT QDQIQQSLNF KKNYENKLYA LNANEFLQAL KDYEHLNQAL
GKIMTYAYLL FAKNTQNGSF YAQYEEECKK IEENLLFFEL EFCELAPEKS QEFTTFCKDY
DFYLSNLLQN KRYNLSKNEE RIILYLSNTG ANAFSRLFDE SMSALKIPFK GKKLSEEEIL
SKMYDEDRKI RKKAAKKFSK VLQKNSRLLS FIINMIKTER KNISLLRGYE NAEISRHISN
QISQKSVDSL IASAQKHFDL VSQFYKRKKQ ILGYDELKDY DRYAPIGKEA SFDFKTSKNI
VLEAFQAFSP QFYDIAKNAF DQGWIDVYPQ ENKQGGAFSH SATSDAHPFV LLNYTDKRRD
LFTLAHELGH TIHQKLSYNV SYLNQNTPLT TAETASVFAE MLVFDFTKDK LKKEELLSLY
ANKIEDIFAT FYRQINFTCF ERRLHAQENE LNTEEINKIW MEESQKMFQD SVKLTKNYAS
WWSYIPHFIH SPFYCYAYAY AQLLVLALYG LYKSKKCENF KELYIKMLSL GGSVSPKELV
GMFGFDIEDE NFWEIGIKEI QKLINEFMEL QSC
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