Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0517 |
Symbol | glcD |
ID | 5389323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 461209 |
End bp | 462591 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640861602 |
Product | glycolate oxidase, subunit GlcD |
Protein accession | YP_001397696 |
Protein GI | 153952228 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0493306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AATTTGAACA ATATTTTAAA CGATTTTTAG GAGAAGAAAA CGCTTATTTT GATGAAATTC ACAAAAGAGC TTATAGTTAC GATGCGACAA AAAAGCATTA TTTACCTGAT GGGGTTCTTT TTCCAAGAAA TGAAGAAGAT ATTGCTCAAA TTTTAAAATT TTGTAATGAA AATAATATCA TAGTCATACC GCGAGGCTCA GGATCTGGTT TTACAGGAGG AGCTTTAGCT GTTAATGGCG GGGTGGTGCT TGCTTTTGAA AAGCATATGA ATAAAATTTT AGAAATTGAT CTTGAAAATT TAGTGGCTGT TGTACAACCT GGGGTTATTA ATATACATTT ACAAAAAGAA GTGGCTAAAT ACGGACTTTT TTACCCGCCT GACCCTGCTA GCATGGAGTA TTCTAGCTTA GGGGGTAATG TAAGTGAAAA TGCTGGGGGA ATGAGAGCTG CAAAATATGG CATTACAAAA GATTATGTGA TGGCTTTAAG GGCTGTTTTG CCTAGCGGAG AAATTATTCG CGCAGGAAAA CGGACTATTA AAGATGTGGC AGGTTATAAT TTGGCAGGAA TTTTAATCGC TAGTGAAGGT TCTTTGGCAG TTTTAAGTGA GCTTACTTTA AAATTAATAC CTTTACCTAA ATTCAAAAAA ACTGCTTTAG CTATTTTTCC AAGTGTAAAA AGTGCTATGA ACGCGGTTTA TAAAAGTCTC GCTAGTGGTG TAAGTCCTGT ATCTATGGAA TTTTTAGACA ATCTTAGTAT TAGAGCGGTT GAGAGTAAAT TTAACAAAGG TTTGCCTATA GAAGCGGGCG CTATTTTGAT CGCTGATGTG GATGGTAATG TTAAAGAGGC TATTGATGAG GATTTAAGAA ATTTAGAACA TTATTTTTTA GAAGCTGGCG CTAGCGAATT TAAAATAGCA AAAGATGAAC AAGAAACCGC AGATATTTGG TTTGCTAGAA GAAATTGTTC TCAAAGTATT GCCATGTATG GAACTTTAAA ACTTAATGAA GATATTACAG TTCCGCGTTC TAAGCTACCT GCTTTGCTTG AAGGTATAGA TGAAATTTCT AAAAAATATG GTTTTAAAAT CCCTTGTTTT GGTCATACAG GGGATGGAAA TGTGCATACT AATGTTATGG TTCCTGATAA AAATGATAAA GAGCAGGTGA AAAAAGGCTA TGAAGCTGTG GAAGAGATTT TTAAATTAAC AGTGAAACTT GGAGGAACTT TAAGCGGAGA GCATGGTATC GGACTCTCTA AAGCACCTTT TATGAATTTA GCTTTTTCTG AAGCCGAAAT GAATTTAATG AGAAATATTA AAAAAGCTTT TGATCCAAAT AATATACTAA ATCCTTTTAA AATGGGACTT TAG
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Protein sequence | MKKEFEQYFK RFLGEENAYF DEIHKRAYSY DATKKHYLPD GVLFPRNEED IAQILKFCNE NNIIVIPRGS GSGFTGGALA VNGGVVLAFE KHMNKILEID LENLVAVVQP GVINIHLQKE VAKYGLFYPP DPASMEYSSL GGNVSENAGG MRAAKYGITK DYVMALRAVL PSGEIIRAGK RTIKDVAGYN LAGILIASEG SLAVLSELTL KLIPLPKFKK TALAIFPSVK SAMNAVYKSL ASGVSPVSME FLDNLSIRAV ESKFNKGLPI EAGAILIADV DGNVKEAIDE DLRNLEHYFL EAGASEFKIA KDEQETADIW FARRNCSQSI AMYGTLKLNE DITVPRSKLP ALLEGIDEIS KKYGFKIPCF GHTGDGNVHT NVMVPDKNDK EQVKKGYEAV EEIFKLTVKL GGTLSGEHGI GLSKAPFMNL AFSEAEMNLM RNIKKAFDPN NILNPFKMGL
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