Gene JJD26997_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0517 
SymbolglcD 
ID5389323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp461209 
End bp462591 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content34% 
IMG OID640861602 
Productglycolate oxidase, subunit GlcD 
Protein accessionYP_001397696 
Protein GI153952228 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0493306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AATTTGAACA ATATTTTAAA CGATTTTTAG GAGAAGAAAA CGCTTATTTT 
GATGAAATTC ACAAAAGAGC TTATAGTTAC GATGCGACAA AAAAGCATTA TTTACCTGAT
GGGGTTCTTT TTCCAAGAAA TGAAGAAGAT ATTGCTCAAA TTTTAAAATT TTGTAATGAA
AATAATATCA TAGTCATACC GCGAGGCTCA GGATCTGGTT TTACAGGAGG AGCTTTAGCT
GTTAATGGCG GGGTGGTGCT TGCTTTTGAA AAGCATATGA ATAAAATTTT AGAAATTGAT
CTTGAAAATT TAGTGGCTGT TGTACAACCT GGGGTTATTA ATATACATTT ACAAAAAGAA
GTGGCTAAAT ACGGACTTTT TTACCCGCCT GACCCTGCTA GCATGGAGTA TTCTAGCTTA
GGGGGTAATG TAAGTGAAAA TGCTGGGGGA ATGAGAGCTG CAAAATATGG CATTACAAAA
GATTATGTGA TGGCTTTAAG GGCTGTTTTG CCTAGCGGAG AAATTATTCG CGCAGGAAAA
CGGACTATTA AAGATGTGGC AGGTTATAAT TTGGCAGGAA TTTTAATCGC TAGTGAAGGT
TCTTTGGCAG TTTTAAGTGA GCTTACTTTA AAATTAATAC CTTTACCTAA ATTCAAAAAA
ACTGCTTTAG CTATTTTTCC AAGTGTAAAA AGTGCTATGA ACGCGGTTTA TAAAAGTCTC
GCTAGTGGTG TAAGTCCTGT ATCTATGGAA TTTTTAGACA ATCTTAGTAT TAGAGCGGTT
GAGAGTAAAT TTAACAAAGG TTTGCCTATA GAAGCGGGCG CTATTTTGAT CGCTGATGTG
GATGGTAATG TTAAAGAGGC TATTGATGAG GATTTAAGAA ATTTAGAACA TTATTTTTTA
GAAGCTGGCG CTAGCGAATT TAAAATAGCA AAAGATGAAC AAGAAACCGC AGATATTTGG
TTTGCTAGAA GAAATTGTTC TCAAAGTATT GCCATGTATG GAACTTTAAA ACTTAATGAA
GATATTACAG TTCCGCGTTC TAAGCTACCT GCTTTGCTTG AAGGTATAGA TGAAATTTCT
AAAAAATATG GTTTTAAAAT CCCTTGTTTT GGTCATACAG GGGATGGAAA TGTGCATACT
AATGTTATGG TTCCTGATAA AAATGATAAA GAGCAGGTGA AAAAAGGCTA TGAAGCTGTG
GAAGAGATTT TTAAATTAAC AGTGAAACTT GGAGGAACTT TAAGCGGAGA GCATGGTATC
GGACTCTCTA AAGCACCTTT TATGAATTTA GCTTTTTCTG AAGCCGAAAT GAATTTAATG
AGAAATATTA AAAAAGCTTT TGATCCAAAT AATATACTAA ATCCTTTTAA AATGGGACTT
TAG
 
Protein sequence
MKKEFEQYFK RFLGEENAYF DEIHKRAYSY DATKKHYLPD GVLFPRNEED IAQILKFCNE 
NNIIVIPRGS GSGFTGGALA VNGGVVLAFE KHMNKILEID LENLVAVVQP GVINIHLQKE
VAKYGLFYPP DPASMEYSSL GGNVSENAGG MRAAKYGITK DYVMALRAVL PSGEIIRAGK
RTIKDVAGYN LAGILIASEG SLAVLSELTL KLIPLPKFKK TALAIFPSVK SAMNAVYKSL
ASGVSPVSME FLDNLSIRAV ESKFNKGLPI EAGAILIADV DGNVKEAIDE DLRNLEHYFL
EAGASEFKIA KDEQETADIW FARRNCSQSI AMYGTLKLNE DITVPRSKLP ALLEGIDEIS
KKYGFKIPCF GHTGDGNVHT NVMVPDKNDK EQVKKGYEAV EEIFKLTVKL GGTLSGEHGI
GLSKAPFMNL AFSEAEMNLM RNIKKAFDPN NILNPFKMGL