| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0497 |
|---|
| Symbol | htrA |
|---|
| ID | 5389357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 445955 |
|---|
| End bp | 447373 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640861586 |
|---|
| Product | protease DO |
|---|
| Protein accession | YP_001397681 |
|---|
| Protein GI | 153950970 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0231688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTTTTTTATC ATTAAGTTTA GCAAGTACTT TATTTGCTGC AAGTATTAAT
TTTAACGAAT CAACTACAAC AGCTAATCGT GTAAATCCTG CCGCTGGAAA TGCAGTGCTT
TCTTATCATG ACTCTATTAA AGATGCAAAA AAATCAGTGG TTAACATTTC CACCTCAAAA
ACTATTACAA GAGCGAATCG TCCAAGCCCT TTGGATGATT TTTTTAATGA TCCTTATTTT
AAACAATTTT TTGATTTTGA TTTTCCTCAA AGAAAAGGAA AGAATGATAA AGAAGTGGTA
AGTTCTTTAG GATCAGGGGT GATTATTTCA AAAGATGGTT ATATAGTAAC AAATAATCAC
GTTGTAGATG ATGCTGATAC GATTACAGTG AATTTACCAG GAAGCGATAC AGAATATAAA
GCAAAACTTA TAGGTAAAGA TCCAAAAACA GATTTGGCTG TTATAAAAAT AGAGGCTAAT
AATCTTTCAG CTATTACTTT TACAAATTCT GATGATTTAA TGGAAGGAGA TGTTGTTTTT
GCACTTGGAA ATCCTTTTGG AGTCGGTTTT AGTGTTACAA GTGGGATAAT ATCTGCTTTA
AACAAAGACA ATATAGGTTT AAATCAATAT GAAAATTTTA TACAAACAGA TGCTTCTATC
AATCCAGGAA ATTCAGGTGG AGCTTTGGTG GATAGTCGTG GATATTTAGT AGGTATTAAT
TCAGCTATTC TTTCTCGTGG AGGTGGAAAC AACGGCATAG GTTTTGCTAT ACCTTCAAAT
ATGGTTAAAG ATATAGCTAA AAAACTTATT GAAAAAGGTA AGGTTGATAG AGGATTTTTG
GGTGTGACTA TTTCAGCTTT GCAAGGTGAT ACTAAAAAAG CTTACAAAAA TCAAGAAGGA
GCTTTAATCA CTGATGTTCA AAAAGGTTCA AGTGCTGATG AAGCAGGGAT TAAGCGTGGA
GATTTAGTTA CTAAAGTTAA TGATAAGGTT ATAAAAAGTC CTATTGATCT TAAAAATTAT
ATAGGAACTT TAGAGATTGG TCAAAAAATT TCATTAAGTT ACGAAAGAGA TGGAGAAAAT
AAGCAAACAA GTTTTACTCT TAAAGGTGAA AAAGAAAATC CTAAAGGCGT ACAAAGTGAT
TTGATTGATG GTTTGAGTTT GAGAAATTTA GATCCAAGGC TTAAGGATCG TTTGCAAATT
CCAAAAGATG TTAATGGTGT TTTGGTTGAT AGTGTTAAAG AAAAGAGCAA AGGAAAAAAT
TCTGGTTTCC AAGAGGGTGA TATTATCATA GGTATTGGAC AAAGTGAAAT TAAAAATTTA
AAAGATCTAG AACAAGCTTT AAAACAAGTT AATAAAAAAG AATTTACCAA AATTTGGGTA
TATCGCAATG GTTTTGCGAC TTTGCTTGTG CTTAAATAA
|
|---|
| Protein sequence | MKKIFLSLSL ASTLFAASIN FNESTTTANR VNPAAGNAVL SYHDSIKDAK KSVVNISTSK
TITRANRPSP LDDFFNDPYF KQFFDFDFPQ RKGKNDKEVV SSLGSGVIIS KDGYIVTNNH
VVDDADTITV NLPGSDTEYK AKLIGKDPKT DLAVIKIEAN NLSAITFTNS DDLMEGDVVF
ALGNPFGVGF SVTSGIISAL NKDNIGLNQY ENFIQTDASI NPGNSGGALV DSRGYLVGIN
SAILSRGGGN NGIGFAIPSN MVKDIAKKLI EKGKVDRGFL GVTISALQGD TKKAYKNQEG
ALITDVQKGS SADEAGIKRG DLVTKVNDKV IKSPIDLKNY IGTLEIGQKI SLSYERDGEN
KQTSFTLKGE KENPKGVQSD LIDGLSLRNL DPRLKDRLQI PKDVNGVLVD SVKEKSKGKN
SGFQEGDIII GIGQSEIKNL KDLEQALKQV NKKEFTKIWV YRNGFATLLV LK
|
|---|
| |