| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0248 |
|---|
| Symbol | |
|---|
| ID | 5389611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 228562 |
|---|
| End bp | 229872 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640861375 |
|---|
| Product | major facilitator superfamily protein |
|---|
| Protein accession | YP_001397475 |
|---|
| Protein GI | 153952283 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA CCCTTAACCA AAAAGATATA AAAGTTTTAG GACTTTCATC ATTAGGCGGA
ACTTTAGAAT TTTATGATTT TATCATTTTT GTATTTTTTG CAAATTATAT TTCAACAAAC
TTTTTTCCAA AAGATTTAAG TAGTTTTTGG CAAATGTTTA ATACTTATGG AATATTTGCA
GCTGGATATT TAGCACGTCC TTTAGGGGGT GTGATACTGG CACATTTTGG GGATAAATTT
GGACGCAAAA GAATGTTTAT GATTAGTATT TTGTTAATGG TTATTCCAAC TTTTACTCTA
GCTTTTATTC CAAATTATGA AAGCATAGGT TTTCTTTGTA TTGTGCTTTT AGTTTTTATA
CGCATTTGTC AAGGCATTGC TATAGGCGGG GAACTCCCTG GAGCTTGGGT TTTTGTATAC
GAACACGCAC CACAAGGTCA AAAAAGAACT TATTTGGGAA TTTTAACTGC TTCGGTTGTA
GGTGGAATTT TATTAGGTAG TTTAGTCTTT TTAATTATGA ATAAAATTTA TACTCAAGAA
GAACTTCATG AATGGGCTTG GAGAATTCCT TTCTTTTTAG GTGGAATTTT TGGGATTATT
TCTGCTTATT TGAGAAAATT TTTAAGAGAA ACACCTGTTT TTGAACAAAT GAAAAAAGAC
AAAGCTTTAG AAAAATTTCC TTTAAAAGAA GTGTTCAAAA AAGCTAAAAT GGGAATTGTT
CTTTCTATGA TGATTACTTG GGTTTTAACA GGTTGTATTG TTGTAATGAT TTTGCTTATG
CCTAGCTATA TGGCAAAAAT ACTTCAAATT AACACTTCTA TACAAACCTA TCTTCAAATA
GGTGGAATTT TGCTTATTTG CCTAGGGTGT ATTATAAGTG GAATTTTAGC GGATAAAATA
GGCATTATCA AATCTTGTAT ATTTTTTAGT GTTTTTTTTG GAATTGCAAG CTTGCTTTAT
TTTAATACTC TATATAAACA AAATGCTGAT TTTAACCTAA CAGTTTGCTT ATATTTGTTT
GTATGTTTTT TTGGTGGAGT GATGAATTTT TGTCCTTTAA TAATGAGTGA AGTATTTGAT
GCAAAAATTA AATTTTCAGG ACTTTCTTTT TCATATAATA TTGCTTATGC TATAGCCGGA
GGTTTAACTC CGCAACTTGC TTTTTTCCTG CATAGTTTTG CCTTAGATAA TTTAAGTAAT
TTTTGGCGTT TTTCTTTGGG AGTTTATGTT TTCTTTTTAG CTATTATAGC TTTGCTATGT
GCATTTATTT TCTCTTATCT TAATAATACC CAACGCACAT ACTCTCAGTG A
|
|---|
| Protein sequence | MNKTLNQKDI KVLGLSSLGG TLEFYDFIIF VFFANYISTN FFPKDLSSFW QMFNTYGIFA
AGYLARPLGG VILAHFGDKF GRKRMFMISI LLMVIPTFTL AFIPNYESIG FLCIVLLVFI
RICQGIAIGG ELPGAWVFVY EHAPQGQKRT YLGILTASVV GGILLGSLVF LIMNKIYTQE
ELHEWAWRIP FFLGGIFGII SAYLRKFLRE TPVFEQMKKD KALEKFPLKE VFKKAKMGIV
LSMMITWVLT GCIVVMILLM PSYMAKILQI NTSIQTYLQI GGILLICLGC IISGILADKI
GIIKSCIFFS VFFGIASLLY FNTLYKQNAD FNLTVCLYLF VCFFGGVMNF CPLIMSEVFD
AKIKFSGLSF SYNIAYAIAG GLTPQLAFFL HSFALDNLSN FWRFSLGVYV FFLAIIALLC
AFIFSYLNNT QRTYSQ
|
|---|
| |