Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0191 |
Symbol | |
ID | 5389710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 179866 |
End bp | 181152 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640861332 |
Product | putative transporter |
Protein accession | YP_001397432 |
Protein GI | 153951504 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGTTG TTGCACTTGC TCTAGTGTTT TTAAATAGTT TTTTTGTTTT GTCTGAATTT AGTATTGTTA AAGTACGTCG TTCCAAGCTT GAAGAGATGG TAAAAGAAAA AAAAGCCAGT GCTAAGAAAG CTTTGGAGGT TACTTCAAGA CTCGATACTT ATCTTAGTGC TTGTCAATTA GGAATTACTT TAAGTTCTCT AGCTCTTGGT TGGATAGGTG AGCCCGCTAT TGCAAAAATG CTAGAAATTC CGCTTATTAA TCTTGGTTTT AGCACTGTTA TTATCCATAC TATAGCTTTT ATTATTGCTT TTAGCATTAT TACTCTTTTA CATGTGGTTT TAGGAGAACT TGTGCCAAAA AGTATAGCTA TTGCAGTTGC AGATAAAGCA GTTTTATTTA TAGCTAGACC GCTTCATTGG TTTTGGATAC TCTTTTTGCC TTGTATTAAA ATTTTCGATT TTTTAGCAGG TATAAGTTTG AAACTTTTTG GAATAAAACC TGCTAAAGAA AGCGAGCTAA CTCATAGCGA AGAAGAAATT AAAATCATAG CAAGTGAGAG TCAAAAAGGT GGAGTTTTAG ATGAATTTGA AACAGAGATC ATACGCAATG CTGTTGATTT TTCAGATACT GTTGCTAAAG AGATTATGAC TCCTAGAAAA GATATGATTT GTCTAAATAA ACAAAAAAAT TACGAAGAAA ATATGCAAAT CATTTGTGAA CATAAACATA CTCGCTTTCC TTATATTGAT GGTTCTAAAG ATACTATTTT AGGGATGATA CACATACGAG ATATAATACA AAATGAATTA AGCCATAAAA GTCAAAATTT AGATACTTTT GTTAAACCTT TGATTTTGGT TCCTGAAAAT ATCAGTATTT CAAAAGTACT TGTAATGATG AATAAAGAAC GCTCTCATAC TGCATTAGTA GTTGATGAGT ATGGTGGAAC TGCTGGAATT TTAACCATGG AAGATATCAT GGAAGAAATT ATTGGCGAAA TTAAAAGCGA GCATGAAGAA GACAGCTATA AAAAACTTGC TGAAAATATC TATGAATTTC AAGGACGATG CGATATAGAA ACTGTTGAAG AAATGCTTGT AATAAACTAT GATGAGGATT TAGAACAAGT TACCATAGGT GGATATGTAT TTAATCTTTT AGGACGCTTG CCTATGGTAG GAGATCGCAT TGAAGATGAA CTTTGTTACT ATGAAGTTAA AAAAATGGAT GGGAATTCTA TAGAGCGTGT TAAGGTGGTT AAAAAAACAA ATAAAGATGA AGAATAA
|
Protein sequence | MVVVALALVF LNSFFVLSEF SIVKVRRSKL EEMVKEKKAS AKKALEVTSR LDTYLSACQL GITLSSLALG WIGEPAIAKM LEIPLINLGF STVIIHTIAF IIAFSIITLL HVVLGELVPK SIAIAVADKA VLFIARPLHW FWILFLPCIK IFDFLAGISL KLFGIKPAKE SELTHSEEEI KIIASESQKG GVLDEFETEI IRNAVDFSDT VAKEIMTPRK DMICLNKQKN YEENMQIICE HKHTRFPYID GSKDTILGMI HIRDIIQNEL SHKSQNLDTF VKPLILVPEN ISISKVLVMM NKERSHTALV VDEYGGTAGI LTMEDIMEEI IGEIKSEHEE DSYKKLAENI YEFQGRCDIE TVEEMLVINY DEDLEQVTIG GYVFNLLGRL PMVGDRIEDE LCYYEVKKMD GNSIERVKVV KKTNKDEE
|
| |