Gene YpsIP31758_A0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_A0058 
Symbol 
ID5384112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009704 
Strand+ 
Start bp16987 
End bp17466 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content32% 
IMG OID640857064 
Producttranscriptional activator 
Protein accessionYP_001393253 
Protein GI153930622 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT GGTATCTGTT ATCATACAAA TATGGACAGG TTAACAGAGT TCAATTTGGT 
TTAGATAGAT TAGGCGTTAA TAGTTTCAGC CCAAGTATAC AGGTGAAAAA AGTTAGATCT 
GACAGCGGAA CTATACGCCT TGTAAATGAA CCGATGTTTC CTACATATTT ATTTGTAGAG 
TTTGATATTG AGTCAATACA TACAACAACA ATAAGTTCAA CACTTGGCGT AAATTACTTT 
GTCAAGTTCG GAACAGAACC AAAACCAATT CCGTTATCAC TAATACACCA ACTAATGAAT 
AGGTCTGAAT GTAGTAGTCA AAGAAATGAA GAAATCGATG AAATAGCTAC TATCCCAGAT 
AAAAAATTAC GCTGTGCTTT ATTTATTAAG TTGATAACAC AGATACCAGA TAGTTTTGAA 
CAAAATTCAT TAATTAAAAC TCATCATTTA CCAGCTACAC ATCAAACATT ATCTAGCTAA
 
Protein sequence
MKNWYLLSYK YGQVNRVQFG LDRLGVNSFS PSIQVKKVRS DSGTIRLVNE PMFPTYLFVE 
FDIESIHTTT ISSTLGVNYF VKFGTEPKPI PLSLIHQLMN RSECSSQRNE EIDEIATIPD 
KKLRCALFIK LITQIPDSFE QNSLIKTHHL PATHQTLSS