Gene Anae109_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4425 
Symbol 
ID5374560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp5180027 
End bp5180644 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID640845953 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001381587 
Protein GI153007262 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0203569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCCG ACGACCTCGC GCTGGTCTCC AAGGCCCAGG CCGGCGACCC CGACGCGTTC 
CGCGCGCTGG TCGTCCGCTA CCAGAGGAAG GTGTACGCCT TGGCGCTCGG CATCGTGAAA
GACGGGGATC TCGCCTGGGA CGTCGCCCAG GAGGCGTTCG TGCGGGTCCA CGGGCACCTG
GGCTCTTTCG AGGGCAAGTC GTCGTTCTCG ACCTGGGTCT TCCGCATCGC CACCCACCTG
TCGATCGACG CGGTCCGGCG CGAGCGGAGC GCGCAGAAGG ACGACGTGGA CGAGGTGCGC
GAGGTCGATC TGTCCGAGGC CGGCGAGGGG ATCCTCGCCA CCTCGCTCGG CAACGACCCC
GCCGAGAACG CGCTCCGCCG CGAGATGGCG GAGAAGATCC ACGCCGCGCT CGCGACCTTG
CCGGAGAAGC ACCGCACCAT CCTCGTGCTG CGCGAGGTGG AGGGGCTCTC CTACGAGGAG
CTCGCCGAGC GGCTCGGGAT CCACAAGGGG ACGGTGATGA GCCGCCTCTT CCACGCGCGA
AAGAAGATGC AGGCCGCCCT GCGCGACTAC GCGGAGCGCC CGGAAGTGGA AGCCGAGGAC
GAGGAGTCCG CGCCATGA
 
Protein sequence
MVADDLALVS KAQAGDPDAF RALVVRYQRK VYALALGIVK DGDLAWDVAQ EAFVRVHGHL 
GSFEGKSSFS TWVFRIATHL SIDAVRRERS AQKDDVDEVR EVDLSEAGEG ILATSLGNDP
AENALRREMA EKIHAALATL PEKHRTILVL REVEGLSYEE LAERLGIHKG TVMSRLFHAR
KKMQAALRDY AERPEVEAED EESAP