| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4307 |
|---|
| Symbol | |
|---|
| ID | 5378316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 5047207 |
|---|
| End bp | 5048673 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640845835 |
|---|
| Product | methyl-viologen-reducing hydrogenase delta subunit |
|---|
| Protein accession | YP_001381469 |
|---|
| Protein GI | 153007144 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit
[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.340367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCCC GCGAGCCCCG CATCGTCGCG TTCCTGTGCA GCTGGTGCGC CTACTCCGCC
GCCGACCGCG CCGGCCAGGC GCGCCTCGAG TACCCGCAGA GCCTCCTCAC CGTGCGCGTC
ATGTGCACCG GTCGGGTCGA GCCGGCCTTC GTGCTGCAGG CGTTCCGGGA GGGAGCCGAC
GGCGTGCTCG TCGCGGGCTG CCACCCCGGC GACTGCCACT ACCTCGACGG CAACCTCCGC
GCGGCGGCGC GCCACGCGGT GCTCGTGCGC GCGCTGGAGC AGGCGGGCAT CGAGCCGGCG
CGCTTCCGCG TCGCCTGGGC GAGCGCCGCC GAGGGCGAGC GCTTCGCCGC GACCGTGCGC
GAGATGACCG GGGCGCTGCG AGCGCTCGGG CCTCTCCGCT ACCCCGAACG CGCCCTCGCC
GCGGCCGCGG AGGAGGTGCG GCCTGCGCCC GCCGCGTTCG ACGTGCCGGC GCCGCTGCCG
CCCCGCGCGC CCGGCAAGCC TCGCGTCGCC TTCTACTGGA ACGCCTCCTG CGGCGGCTGC
GAGGAGGCCG TGGTGGACCT CGGCGAGGGG CTCCCGGCCC TGCTCGACCG CGTCGAGGTG
GTCCTCTGGC CCGTGGCGCT CGATCACAAG CGCGCGGACG TCGAGGCGCT GCCCGACGGT
GGGATCGACG TCGCGTTCGT GAACGGCGCG GTGCGGCTCG ACGAGCAGGA GGACTGGTCG
CGCCTGCTGC GCCGCAAGGC GCGCGTGCTC GTGTCGTTCG GCGCCTGCGC CCACATGGGC
GGCGTGGTCG GCCTCGGCAA CCTGGCCACC CCGGAGGAGA TCCTCGACGC CGCCTACCGG
CTCCCCGCGT CCGTCTCGAA CCCCGGCGCG CCGCTCCCGG GCGGCGGCGG CGACGGGCGC
GCGCCGTCGT TGCCGGTGCT CCTCCCGCGC GCGCTCCCGC TCGCCGACGT CGTGCCGGTC
GACTACACCG TGCCGGGCTG CCCGCCCTCG CCGGCCCTCG TCCAGGCGGC GCTCGACGCG
CTGCTGGGCG ACGCGCCGCC GCCGCGCGGC GCGGTGCTCG CCCCCGACGC CGCCCTCTGC
GAGAGCTGTC CGCGCAAGGG ATCGCGCCCG GAGCGGCTCG AGGTGACCGC GCTCCGGCGC
CTCGCCACCT CGCCCGTCGA TCCGGAGCGC TGCTTCCTCG CGCAGGGGCT CGTCTGCCTG
GGGCCGGCGA CGCGCCAGGG CTGCCAGCCC GGCTGCGTCG AGGCCGGCAT GCCGTGCCGC
GGCTGCTTCG GGCCGCTCGA CGGCGTGCGA GACCCCGGGG CGGCGATGCT GTCCGCCTTC
GCGTCGCTGC TCGCGGGGGG CGAGGCGGAG CTGCGGGCCC TCGCCGAGGC GCTGCCCGAT
CCCGCCGGGA CCTTCTGGCG CTACTCGTAC GCGGCCGGGC TCGTGCCCGC GCGCGTGCGG
CCCGCCGGCG AGGAGGGCGA GGGATGA
|
|---|
| Protein sequence | MPPREPRIVA FLCSWCAYSA ADRAGQARLE YPQSLLTVRV MCTGRVEPAF VLQAFREGAD
GVLVAGCHPG DCHYLDGNLR AAARHAVLVR ALEQAGIEPA RFRVAWASAA EGERFAATVR
EMTGALRALG PLRYPERALA AAAEEVRPAP AAFDVPAPLP PRAPGKPRVA FYWNASCGGC
EEAVVDLGEG LPALLDRVEV VLWPVALDHK RADVEALPDG GIDVAFVNGA VRLDEQEDWS
RLLRRKARVL VSFGACAHMG GVVGLGNLAT PEEILDAAYR LPASVSNPGA PLPGGGGDGR
APSLPVLLPR ALPLADVVPV DYTVPGCPPS PALVQAALDA LLGDAPPPRG AVLAPDAALC
ESCPRKGSRP ERLEVTALRR LATSPVDPER CFLAQGLVCL GPATRQGCQP GCVEAGMPCR
GCFGPLDGVR DPGAAMLSAF ASLLAGGEAE LRALAEALPD PAGTFWRYSY AAGLVPARVR
PAGEEGEG
|
|---|
| |