| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4162 |
|---|
| Symbol | fadJ |
|---|
| ID | 5376162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 4880635 |
|---|
| End bp | 4882806 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640845689 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_001381324 |
|---|
| Protein GI | 153006999 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.180685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGG CACAGGCGGC GGCAGCGCAG CAGGCCCGGA GCTTCCGGGT CGAGGTGGCG
GACGGGGTCG CGACCTTGTT CCTCGACGAG CCCGGCGAGA GCGTGAACGT CGTCGAGCCC
GGCGCGGTCG AGGAGTTCTT CCGGCTGCTC GACGGGTTCG CGGGCGACGA CGCGGTGAAG
GGGGTCGTCT TCACGAGCGG CAAGGACGGC TTCATCGCCG GCGCCAAGAT CGACCTCATC
CAGTCGGTCA CGGACGCCGC CGAGGCGGAG CAGCTCGCCC GCGAGATGCA GGCCGGCCTC
GACCGCCTCG AGCGCTACCG CAAGCCGGTG GTCGCGGCGA TCCAGGGCTC CGCGCTCGGC
GGGGGGCTGG AGTGGGCGCT CGCCTGCCAC TACCGCATCG CCACGAGCGA CCCGAAGACC
CAGCTCGGCC TCCCGGAGGT CCAGCTCGGC CTCATCCCCG GCGCCGGCGG CACCCAGCGG
CTGCCGCGGC TCGTGGGGAT CCAGACCGCG CTCGACCTCA TCCTCGCCGG CAAGACGGTG
AAGGCGAAGA AGGCGCTCAA GATCGGCCTC GTGGACGAGG TGGTGCCCTC GCAGCTGCTG
GTCTCGGTGG CCCGCCAGCG CGCGCTCGCG CTCGCGACCG GCAAGCTCCG CCGCGAGCCG
CGGCGCAAGG CGAGCCCGGT CGAGCGGGCG ACGCGCGTGG CGCTCGAGGA GAACCGCGTC
GGGCGCGAGC TGCTCTTCCG CCAGGCGCGC AAGGCGGTGC TCGCGAAGAC GAAGGGCATG
TACCCCGCGC CGGTGCGCGC GCTCGAGGCC ATCGAGTACG GCTACCAGAA GGGCTTCGCG
AAGGGGCTCG AGAAGGAGGC CCAGCTCTTC GGCCAGCTCG CCGTGTCGGA GGTGGCGCGG
CGGCTCATGG AGATCTTCTT CGCCACGACG GCGCTGAAGA AGGACACCGG CGTGGACGAT
CCGGCCGTGA GGCCCAGGCC GGCGCGCAGG GTGGGCGTGC TCGGCGGTGG GCTCATGGGG
AGCGGTATCT CCTTCGTCAC CGCGAACGCC GGGATCCCGG TGCGCATCCG CGAGCGCGAC
GACGCCGCGG CGGGGAAGGC GCTCGGCAGC GTGCGGGCGC TCCTCGACGA GCGCGTGAAG
CGCCGGTCCA TCGACCGGCT CGAGCGCGAC GAGAGGATGC GCCTCGTCAC CGCCACCACC
GACTGGTCCG GCTACGCCGC GGTGGACGTG CTCATCGAGG CGGTCTTCGA GGACCTGGCC
CTCAAGCAGG AGATGGTCCG CGCCTTCGAG GCGGTGAACC CCACCGGCAT CTTCGCCTCG
AACACCTCGT CCATCCCCAT CACGAAGATC GCCGAGGCGT CGGCGCACCC CGAGACCGTG
CTGGGCATGC ACTACTTCTC GCCGGTGCAG AAGATGCCGC TCCTCGAGAT CATCGTGACG
GAGAAGACCT CCAAGGAGGC GACGGCGACC GCGGTCGCGC TCGGCAAGAA GCAGGGCAAG
ACCGTCATCG TGGTGGGCGA CGGGCCGGGC TTCTACACGA GCCGCATCCT CGCCCCGTAC
ATGAACGAGG CGGCCGAGCT GCTGGTGGAG GGCGCGGCGG TCGAGGACCT GGATCGGGCG
CTCGTGGAGT TCGGCTTCCC GGTCGGCCCC ATCACGCTCC TCGACGAGGT CGGCATCGAC
GTGGGCGAGA AGGTCGGCAA GATCCTGCAC GACGCCTTCG GCGCGCGGAT GGCGTCGCCC
GCGGCGCTGC ACGACGTGGT GAAGGCCGGC CGGCTGGGGC GGAAGAACAG GAAGGGCTTC
TACACGTACG GGGAGGACAA GAAGGAGAAG CGAGTGGACG TGACCGTCTA CGACCTCCTC
CCCGGCGGCC GCAGCCGCAA GCCCTTCGCC CACGACGAGA TCCGCGAGCG CGTGGTGCTG
CAGATGGTGA ACGAGGCGAT CCGCTGCCTG GGCGAGGGAA TCCTCCGCAG CGCCCGCGAC
GGCGACGTGG GGGCGGTGTT CGGGCTCGGC TTCCCGCCGT TCCGGGGCGG CCCGTTCCGC
TACGCCGACA AGCTCGGCCC GAAGGAGCTC CTCGCCCGCC TCGAGCGGCT GCGCGCGCGC
CACGGCGAGC GCTTCGCGCC GGCCCCGCTG CTCGTCGAGC ACGCCGCCGC GGGCAGGCCG
TTTCACGGGT AG
|
|---|
| Protein sequence | MMTAQAAAAQ QARSFRVEVA DGVATLFLDE PGESVNVVEP GAVEEFFRLL DGFAGDDAVK
GVVFTSGKDG FIAGAKIDLI QSVTDAAEAE QLAREMQAGL DRLERYRKPV VAAIQGSALG
GGLEWALACH YRIATSDPKT QLGLPEVQLG LIPGAGGTQR LPRLVGIQTA LDLILAGKTV
KAKKALKIGL VDEVVPSQLL VSVARQRALA LATGKLRREP RRKASPVERA TRVALEENRV
GRELLFRQAR KAVLAKTKGM YPAPVRALEA IEYGYQKGFA KGLEKEAQLF GQLAVSEVAR
RLMEIFFATT ALKKDTGVDD PAVRPRPARR VGVLGGGLMG SGISFVTANA GIPVRIRERD
DAAAGKALGS VRALLDERVK RRSIDRLERD ERMRLVTATT DWSGYAAVDV LIEAVFEDLA
LKQEMVRAFE AVNPTGIFAS NTSSIPITKI AEASAHPETV LGMHYFSPVQ KMPLLEIIVT
EKTSKEATAT AVALGKKQGK TVIVVGDGPG FYTSRILAPY MNEAAELLVE GAAVEDLDRA
LVEFGFPVGP ITLLDEVGID VGEKVGKILH DAFGARMASP AALHDVVKAG RLGRKNRKGF
YTYGEDKKEK RVDVTVYDLL PGGRSRKPFA HDEIRERVVL QMVNEAIRCL GEGILRSARD
GDVGAVFGLG FPPFRGGPFR YADKLGPKEL LARLERLRAR HGERFAPAPL LVEHAAAGRP
FHG
|
|---|
| |