| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4080 |
|---|
| Symbol | |
|---|
| ID | 5378091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 4772703 |
|---|
| End bp | 4773635 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640845607 |
|---|
| Product | squalene/phytoene synthase |
|---|
| Protein accession | YP_001381242 |
|---|
| Protein GI | 153006917 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.243563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACCA TGACCATGCC GGCGTCGGAG CAGCCCTCGG CCGCCCAGCT CGTCCACACC
GGGCTCGCGG AGTGCTGGGA GATCCTGCGC GTGCACGGGA AGACGTTCCA CATGATGGCG
AAGCTGCTCG GCCCCGAGCG CGGGAACGAC ATCGCCGCGC TGTACGGGTT CGCGCGCGTC
GCCGACGACG CGGTGGACGT CCCGGCGCCC GGCGACACGC CGGACGACAT CCGCGCGAAG
CTCGCCCGGA TGCAGGCGGA GCTGCGCCGG GCGGTGCGGG GGGAGAGCGC CCAGCCGCGC
TTCGTCGCGC TGGGCGAGAC GGTGCGCCGT CACGCCATCC CCCTCGAGCC CTTCGACGAC
CTCGTCGCCG GCCTGCTCAT GGACCTCGAG GGGGCGCGCT ACCGCACCTT CGCCGACCTG
GAGCTGTACT GCTATCGCGT GGCCGGGACC GTCGGCCTCA TGATCACGCC GGTCGCCGGC
TACCGGGAGG GCACCGAGGC GCTCGAGCAC GCGAAGACGC TCGGCACGGC CATGCAGCTC
ACGAACATCC TCCGCGACGT GGGGGAGGAT CTCAACCTCG GGCGCGTGTA CCTGCCCGAG
GAGGACCTCG CGCTGTTCGG CCTCGCCGAC GGGCACCTCG CGGCGCGGCG CGTGGACGGC
CGGTTCAAGG CGCTCATGGA CTTCGAGATC GCGCGCGCGC GCGGCCTCTA CGAGCGGGGG
CTGGCCCTCA TCCCGCTCCT CGCCGACGGG CGCGGGCGCC TGGCGTTCCA GTTCGCCGTC
GACGCGTACT CCGCCATCCT CGAGAAGATC CGCGCCAACC GCTACGACGT CTTCCGCCGG
CGGGCCAGCC TCTCCGCGAG CGAGAAGCTC GCGCTCGTCC CGGGCGCCCT GTGGCGCGCG
TCGCTCGCCG CCACCAACGG TCACGCGCAA TGA
|
|---|
| Protein sequence | MQTMTMPASE QPSAAQLVHT GLAECWEILR VHGKTFHMMA KLLGPERGND IAALYGFARV
ADDAVDVPAP GDTPDDIRAK LARMQAELRR AVRGESAQPR FVALGETVRR HAIPLEPFDD
LVAGLLMDLE GARYRTFADL ELYCYRVAGT VGLMITPVAG YREGTEALEH AKTLGTAMQL
TNILRDVGED LNLGRVYLPE EDLALFGLAD GHLAARRVDG RFKALMDFEI ARARGLYERG
LALIPLLADG RGRLAFQFAV DAYSAILEKI RANRYDVFRR RASLSASEKL ALVPGALWRA
SLAATNGHAQ
|
|---|
| |