| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3943 |
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| Symbol | dapD |
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| ID | 5376629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | - |
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| Start bp | 4602543 |
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| End bp | 4603367 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640845467 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001381105 |
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| Protein GI | 153006780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.993295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0337649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT GGAACGAGAT CGAGCGGCGC GTCACGGCCG CGTTCGGCGA CAAGCACAAG
CTGGCCGACT CCGTCCACCG CGCGGCCGTG GTGCAGGCGC TGCACGGCCT GGATCGCGGC
GAGCTGCGCG TCGCGCAGAA GGTGGACGGT GAGTGGAAGG TGAACGCCTG GCTCATGCAG
GCGGTGAACC TCTACTTCGC CATCACCGGC ATGGAGACCC AGGACTTCGG GCCGTTCCAG
ACGCGCGACA AGATCCCGCT GAAGAAGAAC CTCGAGGACG CGGGCGTGCG GCTCGTGCCG
GGCGGCGTCG CGCGCTTCGG CTCGTTCCTC GAGCCGGGCG CGGTGCTCAT GCCCGGCTTC
GTGAACATCG GCGCACGCGT CGGCGCGAAC TCGATGGTGG ACACCTGGGC CACCGTCGGC
TCGTGCGCGC AGGTCGGCCA GAACGTCCAC CTCGCCGGCG GCGTCGGCAT CGGCGGCGTG
CTCGAGCCGC CCGGAGCGCG GCCGAACATC ATCGAGGACA ACGCCTTCAT CGGCAGCCGC
TGCATCCTCG TCGAGGGCGT GCTCGTCGAG GAGGAGGCGG TGCTCGGCGC GAACGTGGTC
ATCACCGCGT CGACGCCCAT CATCGACGTC ACCGGCCCGC AGGAGGTGGT GCACAAGGGC
CGCGTCCCGG CGCGCTCGGT GGTCATCCCC GGCACGCGCC CGAAGCAGTA CCCCGCGGGC
ACCTACCAGA TCCCCTGCGC GCTCATCGTC GGCAAGCGCA GCCCGAGCAC CGACCGGAAG
GTCTCGCTGA ACCAGGCGCT GCGCGACTTC GAGGTCCAGG TGTGA
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| Protein sequence | MTDWNEIERR VTAAFGDKHK LADSVHRAAV VQALHGLDRG ELRVAQKVDG EWKVNAWLMQ
AVNLYFAITG METQDFGPFQ TRDKIPLKKN LEDAGVRLVP GGVARFGSFL EPGAVLMPGF
VNIGARVGAN SMVDTWATVG SCAQVGQNVH LAGGVGIGGV LEPPGARPNI IEDNAFIGSR
CILVEGVLVE EEAVLGANVV ITASTPIIDV TGPQEVVHKG RVPARSVVIP GTRPKQYPAG
TYQIPCALIV GKRSPSTDRK VSLNQALRDF EVQV
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