| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3844 |
|---|
| Symbol | |
|---|
| ID | 5375540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 4482228 |
|---|
| End bp | 4483673 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640845369 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001381007 |
|---|
| Protein GI | 153006682 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.50058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.461173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGA CGAGCCGTCC TCTGACCGTG GTCTCGGTGC TCCTCGGCAC GTTCCTCGCC
GCCATGGAGA TGACCGTCGT CTCGACGGCG ATGCCGACCG TGGTGGGCGA GCTCGGCGGG
CTCTCGCTGT ACGCCTGGGC GTTCTCGGCG TACATGCTCA CAGCCACCGT CACGGTGCCG
ATCCACGGCA AGCTCGCCGA CCTCTACGGC CGAAAGCCCG TCCTCCTCGC CGGGATCGCG
CTCTTCCTCC TCGGGTCGAG CGGGTGCGGC TTCGCGGGGA GCATGGGCGC GCTCATCGCC
TGGCGCGCCG TCCAGGGCCT CGGCGCCGGG GCCATCCAGC CGGTCTCGCT CACCATCGTC
GGCGACCTGT TCGAGCTGCG CGAGCGCGCG CGCATGCAGG GCATCTTCGG CGCGGTCTGG
GGCCTCGCGG GCCTCGTGGG GCCGGTGCTC GGCGGCGCCA TCGTCCACGT GCTCGGCTGG
CGCTGGATCT TCTGGGTGAA CCTGCCGTTC GGGATCGCCA GCGCGGCGGT GCTGGCGATC
GCGTACCACG AGCGGCCGGA GCGCCACCCG CACCGGCTCG ATCTCCCCGG CGCGGCGCTG
CTCTCGATCG CGGTCGTGGC GCTCCTCTTC GCGGCCCGCT CTGGCGCGGC GGCGCTGGCG
GCGCTCCCCG TCGGCGCGCT GGCGCTGGCC GCCTTCCTCC TCGTGGAGCG CCGCGCGCCC
GAGCCGCTGC TGCCGCTGGA CCTCTTCGCG CAGCGGGTGA TGGCCGTGTC CTCCGCGACG
GGGGCGCTGC TCGGCGCCGC CATGCTCGCG ACGGTCACCT TCGTGCCGCT CTGGGTGCAG
GCCATCCTGG GCGCGTCACC CACCGCGGCG GGCGCCGCGA TCGCGCCGAT GGCCGTCGGC
TGGCCGCTCG CGAGCACGCT CGCGGGGCGT CTGCTGCCGA GCCTCGGCTA CCGGCGGCTC
CTGCTGGGCG GCCTCGCGAC GAGCGCGCTC GCCGGGATCG GGCTCGCGCT GCTGCTCGGG
CCGGGGGTGA GCCTCCTCGT GCCCCAGGGG CTCACCTTCG CCTACGGCGT CGGGCTGGGG
CTCGCCAACA CGCCCCTCAT CCTCGCGGTC CAGACCAGCG TGCCCTGGCG CCGGCGCGGC
GTCGCGACCG CGAGCGCGCT GTTCTTCCGC ACCATGGGCG GCACGCTCTC GGTCGGCATC
CTCGGCGGCG TGCTCGCGGT GGGGCTCGCG CGCACCGGCG CCGCGCCCGG GATCGCGGAG
AAGCTGCTCG GCGCCGAGCG CGCCTCGCTC TCCGCGGCGC AGCTCGCCTC GGTGGGCGGC
GCGCTGCAGG GGGCGATGGA GATCGTCTTC TGGAGCGTCG CCGGGATCGC CGCGGCGGCG
CTCCTCGTCG CGACGCGCTT CCCCCGCCTC TCCGTGGAGC CCGCGCCCGC GCCGGAGCGC
GTCTAG
|
|---|
| Protein sequence | MRATSRPLTV VSVLLGTFLA AMEMTVVSTA MPTVVGELGG LSLYAWAFSA YMLTATVTVP
IHGKLADLYG RKPVLLAGIA LFLLGSSGCG FAGSMGALIA WRAVQGLGAG AIQPVSLTIV
GDLFELRERA RMQGIFGAVW GLAGLVGPVL GGAIVHVLGW RWIFWVNLPF GIASAAVLAI
AYHERPERHP HRLDLPGAAL LSIAVVALLF AARSGAAALA ALPVGALALA AFLLVERRAP
EPLLPLDLFA QRVMAVSSAT GALLGAAMLA TVTFVPLWVQ AILGASPTAA GAAIAPMAVG
WPLASTLAGR LLPSLGYRRL LLGGLATSAL AGIGLALLLG PGVSLLVPQG LTFAYGVGLG
LANTPLILAV QTSVPWRRRG VATASALFFR TMGGTLSVGI LGGVLAVGLA RTGAAPGIAE
KLLGAERASL SAAQLASVGG ALQGAMEIVF WSVAGIAAAA LLVATRFPRL SVEPAPAPER
V
|
|---|
| |