| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3556 |
|---|
| Symbol | |
|---|
| ID | 5378193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 4169158 |
|---|
| End bp | 4170369 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640845078 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_001380721 |
|---|
| Protein GI | 153006396 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.597428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.136455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCGC TCCAGGACGT CCAGGCCGCG CTCGGTCGGA TCCGGGATCG CATCTACGTC
TCGCCCTGCG CCCGCACCGA GACGCTCTCC CGGCTCACCG GCACGAGCGC CCATCTCAAG
CTCGAGAACC TCCAGATGAC CGGCGCCTAC AAGGAGCGCG GGGCGCTGAA CAAGCTCCTG
CTGCTCTCGC CGGCGGAGCG CGACCTCGGC CTCATCGCGG CGAGCGCGGG GAACCACGCG
CAGGCGGTCG CCTACCACGC CGGGCGGCTC GGCGTGAAGG CGACCATCGT GATGCCGGAG
ACCACGCCCA TCACGAAGGT GGCGAACACC CGCGCCCACG GCGCGCGCAT CGTGCTGCAC
GGCGCCAGCT ACGACGAGGC GTACGCGGAG GCGCGGCGGC TGGAGCAGGC CGAGGGGCTC
ACCTTCGTCC ACCCGTTCGA CGACCCCGCC ATCATCGCGG GCCAGGGCAC CGTCGGGCTC
GAGATCCTGG AGCAGGACCC GGCGGTCGAG ACGATCGTCG TGCCCATCGG AGGCGGCGGT
CTCGTCTCCG GCGTCGCGGT GGCGGCCAAG GAGACGCGGC CCGGCGTACG CGTCGTGGGC
GTCGAGACGG AGGTGCTGCC CTGCATGGTC GCGGCGCTCG AGGCCGGCAA GCCGGTGACG
CTCGAGGCGG CGAACACCGT CGCCGACGGC ATCGCGGTGA AGCGCGCGGG CGAGCTCACG
CTCGATCACG TGAAGCGCTA CGTGGACGAC ATCGTCACGG TCTCGGAGGA GGAGATCGCG
AGCGCGATCC TGTACCTGCT CGAGAAGGAG AAGACGGTCG CGGAGGGCGC CGGCGCGGTC
GCGGTGGCGG CGCTCATGCA GCGCAAGATC CGCGGCGTCG AGGGGCGGAA CGTCGTCGCC
GTCGTCTCCG GTGGCAACAT CGACGTGAAC CTCGTCGCGC GCGTGATCGA GCGCGGCCTC
GTCAAGGACG GGCGGCTCGT CCGGATCAGC GTGGCGCTCC AGGACAAGCC GGGGCAGCTC
GCCAAGGTGT CCGCCATCGT GGCCCACCAC CGCGCGAACG TGATCGAGGT TCACCACACG
CGCGCGTTCG CCTACCGCTT CGGCGACACG ACGCTGCAGC TGACCCTCGA GACGCGCGGG
CCAGAGCACG TCGAGGAGCT CCTCACGGCC CTGCGCGAGC GGGGATACCA GGTGCAGCGG
ATGGGGATGT AG
|
|---|
| Protein sequence | MVSLQDVQAA LGRIRDRIYV SPCARTETLS RLTGTSAHLK LENLQMTGAY KERGALNKLL
LLSPAERDLG LIAASAGNHA QAVAYHAGRL GVKATIVMPE TTPITKVANT RAHGARIVLH
GASYDEAYAE ARRLEQAEGL TFVHPFDDPA IIAGQGTVGL EILEQDPAVE TIVVPIGGGG
LVSGVAVAAK ETRPGVRVVG VETEVLPCMV AALEAGKPVT LEAANTVADG IAVKRAGELT
LDHVKRYVDD IVTVSEEEIA SAILYLLEKE KTVAEGAGAV AVAALMQRKI RGVEGRNVVA
VVSGGNIDVN LVARVIERGL VKDGRLVRIS VALQDKPGQL AKVSAIVAHH RANVIEVHHT
RAFAYRFGDT TLQLTLETRG PEHVEELLTA LRERGYQVQR MGM
|
|---|
| |