Gene Anae109_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3533 
Symbol 
ID5378360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4138873 
End bp4141299 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content78% 
IMG OID640845055 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001380698 
Protein GI153006373 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.229129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.100521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGATC TCCTCGAGCG CGTTTGGCCC GTCTTCGAGG CCGAGACCCG CGAGCAGGTT 
CAGGCGCTCG CCGCCGGCGT GCTGGAGCTC GAGGCGGCGC CGTCGCCCGA CGCGGTGATG
CCGCTCCGCC GCATCGCCCA CACCTTGAAG GGGACGGCGG CGAGCCTGGG GCTCCATGAC
ATCGAGCAGG CCGCCCACGC GGTCGAGGAC GTGCTCGTGC TCGCCGACGG CGACCGCGGC
CTGCCCGCCG GAGCGGTGGA GGCCGTGCTG CGCGCGGCCC GCGCGGTCGA GGAGGCGCTG
ACCTCGCCCA CGCCCGGCCG GATCGCCGAC ATGGCCGAGG TCCTCGCCCG CCTGGCAGCC
GTGAGCGACG GGCGCGCGCC CGCGCCGCTG GCGCCGGAGC CCGGCGAGGG CCGCTCCGCC
GAGCTGGACG TGCTCGCCGC GGAGCTCTCC TCGATCTGCG TCGTCGACGG CGCCGAGCGC
GCCGCGCACG CCGCACGCGC GCGCGCCGTC GCGGAGCGGC TGGAGGGCGC GCTGCGCGGG
CGGGCGGGGG AGCTGGCGGG GCGAGTGGCG CGCAGCGTCG GCGAGCTGGA GGCGGACGGC
GCCGACGTCG CCCGCGCGGT CGCCCGCGCG GCCGCCGAGC TGGTGGAGCT CCGCGCCGCC
CTGGTGGCCA CCTCCGTCGC CGGGCCGCGC GGTGACGCGC CGGACGGCGG AGCCTCGCGC
CCGAGGAAGG GCGAGGACCG CGTGGTCCGC GTGGACGCGA GCCGCCTGGA CACGGTGTCC
GCCGAGGTGG ACCAGCTCGT CGTCGGCGTC TCTCGCCGCG AGCGGCGTGG GCGCGACCTG
GAGCGGATGG CGCAGGCGCT GCGCGAGGCG CTCCTGCTCG TGCAGCGCGG GCTCGACGAG
GCGGGGATCC CGCACGAGAC CCGGCCGCGC GCGCTCGACG AGGGCGTCGA CCGGATCCGC
ACCCACGCGG CGGACGTCGG CCGCGCCGCT CGCGAGCTCC GGCGCGAGGC GGAGCGCGAG
CGGCTCTCGG CCCACGCGCT GCGGGACACG CTGCAGGAGC TGCGCATGGT CCCCGCGGAG
TCGGCGCTGC TGGCGCTGCG GCCCACCGTG CGGGAGGTGG CCGCGCGGCT CGGCAAGCAC
GTCTCGCTGC GGCTCGAGGG GGGCGAGGTC CGCCTCGACC GGCGCGTGCT CGACGAGCTC
AAGGGACCGC TCCTGCACCT CGTGCGCAAC GCCCTCGATC ACGGGATCGA GCCCCCCGAG
GCGCGGCGCG CGGCGGGCAA GCCGGCCGAG GCGCTCCTCG CGGTGCGGGT CGAGCCGCGC
GGCGATCGTG TGCTCGTCAC GGTCCGTGAC GACGGCGCGG GGCTCTCGCC CGAGCGGCTG
CGGGCCGCCG CCGTGCAGCG CGGCGACGTG ACCGCAGCGG AGGCGGCGCG CCTGAGCGAC
GCGGACGCCC TCCGCCTCGC CTTCCGGTCG GGCATCTCCA CCGCCGCCGA GATCACGGAG
CTGTCGGGGC GGGGCGTCGG CCTCGACGTG GTCGCCGAGG CGGTGCGCCG CCTGGGCGGA
GGGGTGGACG TCGCGAGCGA GCGCGGCCGC GGCGCGTCCT TCGTGATCGA CGTGCCGCTC
ACCATCGCAG GCACCACCGG CCTGCTGTTC CGCGCGGGCG GCGGGCTGGC GCTCCTCTCC
GCCGACGCCA TCGAGCGGGT CCTGCTCGTG GGCCCGGGCG ACCTCGGGAC GGTCGCCGGA
CACGTGATGG TCTGCGTCGA CGGCGACCAG ATCCCGTTCG CGCCGCTGGC GCAGGTCGTC
GGGGCGAGCG GCTCGGCGAG GCCCTCGGAG ACGGCCGTCG CGCTGCTCGT GGCCTCCGGC
GGGCGAAGGG CGGCCCTGGC CGTCGACGAG GTGCTCGGCG AGCAGGCCAT CGTGGTGAGC
TCGCTGGGAC GGCGGATGTC CACGGCGCCC CACATCGCGG GCGCGGCGGT GCTGGACGAC
GGCCGCGTGG TGGCGGTGCT CCAGCCGGCG CACCTCGTGG GGACGGCGCC GATCCCGGAG
GAGGCGAAGG GGCCGTCGCC GAGGCGCATC GTCGTCGCCG ACGACTCGCT GGGCACGCGC
TCGGCGGTGA AGGCGATCCT CGAGATCGCC GGCTTCGTGG TGCTCCCGGC CGCCGACGGC
GAGGAGGCGC TCGCGCTCGC CCGAGATCCC GGCTGCGATC TCGTCGTGAC CGACGTCCAG
ATGCCGCGCC TCGACGGAGT GAGCCTGACC CGGCGGCTGA GGGCGGACCC GAAGCTCTCG
CACGTGCCCG TGGTCCTCGT GACCTCGCTG GACGCGCCCG AGGATCGCGC CGCGGGGCTC
GCCGCCGGCG CCGACGGCTA CCTCGTGAAG CGCGACGTGC AGCGCGGGAA GCTGCTGGAC
CTCGTCCGGC AGCTGCTCCC CGCATGA
 
Protein sequence
MSDLLERVWP VFEAETREQV QALAAGVLEL EAAPSPDAVM PLRRIAHTLK GTAASLGLHD 
IEQAAHAVED VLVLADGDRG LPAGAVEAVL RAARAVEEAL TSPTPGRIAD MAEVLARLAA
VSDGRAPAPL APEPGEGRSA ELDVLAAELS SICVVDGAER AAHAARARAV AERLEGALRG
RAGELAGRVA RSVGELEADG ADVARAVARA AAELVELRAA LVATSVAGPR GDAPDGGASR
PRKGEDRVVR VDASRLDTVS AEVDQLVVGV SRRERRGRDL ERMAQALREA LLLVQRGLDE
AGIPHETRPR ALDEGVDRIR THAADVGRAA RELRREAERE RLSAHALRDT LQELRMVPAE
SALLALRPTV REVAARLGKH VSLRLEGGEV RLDRRVLDEL KGPLLHLVRN ALDHGIEPPE
ARRAAGKPAE ALLAVRVEPR GDRVLVTVRD DGAGLSPERL RAAAVQRGDV TAAEAARLSD
ADALRLAFRS GISTAAEITE LSGRGVGLDV VAEAVRRLGG GVDVASERGR GASFVIDVPL
TIAGTTGLLF RAGGGLALLS ADAIERVLLV GPGDLGTVAG HVMVCVDGDQ IPFAPLAQVV
GASGSARPSE TAVALLVASG GRRAALAVDE VLGEQAIVVS SLGRRMSTAP HIAGAAVLDD
GRVVAVLQPA HLVGTAPIPE EAKGPSPRRI VVADDSLGTR SAVKAILEIA GFVVLPAADG
EEALALARDP GCDLVVTDVQ MPRLDGVSLT RRLRADPKLS HVPVVLVTSL DAPEDRAAGL
AAGADGYLVK RDVQRGKLLD LVRQLLPA