| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3476 |
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| Symbol | |
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| ID | 5377419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | + |
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| Start bp | 4081771 |
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| End bp | 4083675 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 640845001 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001380644 |
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| Protein GI | 153006319 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.287996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.161614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC TCGTCCTCGA CCGCCTCTGG CCCATGCTCG TGTTCCTCGG CCTGCTGCTC
GCGGGGGCGC TCGCGCTCGA GACCTTCGCC GCGCGGCGCG GCAACGACCC GCTCGTCATC
TCCATCGCGG GGGACGAGGT GACGCTGGAC GACGACGACG CGTCGGCCTC CGCGGCGACG
GCCGCGGATG CGCCGGTCTC GGACGCGCAC GCGCGCGCGC GGCGCGCGGC CCGCCGGGGC
GAGCAGGCGG AGGCGCTGAA GCTCTACGAG GCCGCGCTCG CCGCGAGCCC CGGGGCCGCC
GTCCTCGAGG AGGAGCTCGG CGCCGTGCTC CTCGCCGCGG GCGACGCGGC CAAGGCGCTC
CCGCACCTGG AGCGCGCGGA GCAGCTCGAC CCCGGCGCGC AGCGCGCGCT CCGCGTCGGG
CTCGCCCGCG CGCGCCTCGG CGACCTGGAG GGCGCCGAGC GCGACCTCCG CCGCTCGCTG
GAGCGCCGGC CCACCGGCGA CGCTCGCGTC GCGCTCGGGA ACGTGCTCCG GCGCCGCGGC
GATCCGGTCT CGGCCATCGC GCTGCTGGAG CCGGCGGTCG CCTCCGGATC GAACGAGGAT
CGCGCCAGGG CGCTCGTCGC GCTCGGCGCG GCCGAGCTCG CCGCCGGGCG GCGCGAGTAC
GCGGAGCTCC GCTTCTCGAA GGCCGTCGAG TACGCGCCCG CGCGCGTGGA GATCCTGCTC
GGCGTGGCGC GCGCCTGGCT CGCCACGGGC ACCGCTCCCG ACGTGCGCCG CGCGGTGCAG
GTGCTCCTCA GGGCCGCGGA CCTGGCGCCG GACGTCGCCG CGGTCCACGC GCTGCTCGGG
CGCGCCCACG AGCGTGCGGA CGAGCCGGGC GCGGCGCTCG AGGACTACGA TCGCACCCTG
CGTCTCGACC CCACCCACCG GTACGCGCGG CGCCGCCTGC TGCGGCTCGC GCTCCAGGCG
CGAGACTTCG CCCGTGCGCG CCACGAGGCG GACCGGCTCG TCGCCGACCG GGCGGAGGAG
CCGGAGCACC ACTTCCTCGT GGCGCTCGTC GCCGATCGCG ACGACCGCGA CGACGACGCG
CGGCGGGCGT ACCGGAAGGC GATCGCGGTC GCCAGGGGCG ACTACCCCGA GGCGTACCTG
AACCTCGGCG CGCTCGAGAA GCGCGCGGGC GACGTCGCGG CCGCGCGCGC GGCGTACGGC
GAGGCGCTGC GCCTGCGGCC CGATTACGGG GCCGCCTGGC TGAACCTCGG CAAGCTCGAG
GAGGCGGGCG GCGACCCGGG CGCGGCCGAG GCGGCGTACC GCAAGGCCCT CGCGCTCGAC
GCGAAGTACG CCGCCGCCTG GCTCGCGCTC GGGCAGCTCC AGTCCGCCGC GGGGAGGTTC
GAGGAGGCGC GGTCGTCGCT CGGACGCGCC CTCGTGGCCC GCCCGGGCTA CGACGCCGCC
CAGCTCTCGC TGGGCGTCGC CGCCGCGCGC GCCGGCCGTC CCGACGAGGC CATCGCCGCG
TACCAGGCGC TCCTCGCCCG CTCGCCGCGG AACGTCTCCG CCTGGTACGA CCTCGCCCTG
GTGCTCGAGG CGGTCTCCCG GCGCGACGAG GCGCGCGCCG CCCTCGCGCG CGCGCTCGCG
ATCGACCCCG GCCACGCACC CTCGCTGCGC ACCGTCGCCC AGCTCCACCT CGACTCTGGC
CGGCTGGCGG AGGCTCGCAA GGCGTTCGAG GAGCTCCTCG ATCTCGTCCC GGGAGATCTG
GAAGGCCGCG CCGCGCTCGC GGAGATCTCC GCCCGCGAGG GGAACCGCGC CGCCTGCGAC
GCAGCCGCGC GCCGCCTCCT CGCCGAGGCC CCCCAGGACC CGCGCGTCCA GACCCTGCCC
GCGCGGTGCG CCGGCCCCCC CGCGCGCACC GTCTCCGCGC CCTAG
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| Protein sequence | MNPLVLDRLW PMLVFLGLLL AGALALETFA ARRGNDPLVI SIAGDEVTLD DDDASASAAT
AADAPVSDAH ARARRAARRG EQAEALKLYE AALAASPGAA VLEEELGAVL LAAGDAAKAL
PHLERAEQLD PGAQRALRVG LARARLGDLE GAERDLRRSL ERRPTGDARV ALGNVLRRRG
DPVSAIALLE PAVASGSNED RARALVALGA AELAAGRREY AELRFSKAVE YAPARVEILL
GVARAWLATG TAPDVRRAVQ VLLRAADLAP DVAAVHALLG RAHERADEPG AALEDYDRTL
RLDPTHRYAR RRLLRLALQA RDFARARHEA DRLVADRAEE PEHHFLVALV ADRDDRDDDA
RRAYRKAIAV ARGDYPEAYL NLGALEKRAG DVAAARAAYG EALRLRPDYG AAWLNLGKLE
EAGGDPGAAE AAYRKALALD AKYAAAWLAL GQLQSAAGRF EEARSSLGRA LVARPGYDAA
QLSLGVAAAR AGRPDEAIAA YQALLARSPR NVSAWYDLAL VLEAVSRRDE ARAALARALA
IDPGHAPSLR TVAQLHLDSG RLAEARKAFE ELLDLVPGDL EGRAALAEIS AREGNRAACD
AAARRLLAEA PQDPRVQTLP ARCAGPPART VSAP
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