Gene Anae109_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3408 
Symbol 
ID5377599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4003543 
End bp4005264 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content80% 
IMG OID640844927 
Producthistidine kinase 
Protein accessionYP_001380576 
Protein GI153006251 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0068838 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.336005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTCC GCACCCGCCT CGCCCTCGCC TTCGCGCTGT TCGCGGCCGT GCCGCTCGCC 
GCCGCGCTGT GGCCGGTGTC GCACGCCCTC TCCGGCGCCC TCTCCACCGA GCACGCGGCG
CGCCTCGACG GCGCCGCCCG CGCCCTGGAC GGCGAGCTCG CCCGCCTCGC CCGCGAGGCC
GGGACGGCCG TCGACGAGCT GGCGCGCTCG GCGGACGCGG AGGCGCTCGC GCGGGAGCTC
GGGACGGGCG CGCTCGCGCC CGCCGACGCC GCGCCGCGCG CGCGCGAGTG GATGGAAGCG
CGGGGCCTCG ACGTGCTCGC GGTGGCCGAG CCGGACGGAC GCGTCGTCTC CTCGGGGCAC
CTGCCCGGCC GCGCCGGCGA CGTGGACGCC GAGGTCGCCG CCCTGCTCGC GACGCCCCCC
TCGCGCGCGG CGCCGCACCG GGTGATGCGG GCCGGGCCCG ACGGCGTGGA GCCCGTGCTC
GCGCTGGTGG CCTGGGCGCC CGTCCCGGGA GACCCGCTCC GCGTCGCGGG GGGGCTCGCG
CTCGGGCCCG AGCGGGCCGC GCGCCTCGCC GCGCTCACGG GCGGCGCCAT CGCCATCCGC
GCGCCCGACG GCGCGCTCCT CGCGGACGCC GCCGCGCCGG GGAGCCCCGC CTCCGGCGGC
GCACCCGACC TCGCCGACCG GCTCTCGGCG CGCCTCGGGG CGCTCGGGAC GCCGGTCCGA
TCCCTCGCGC TCGGCCCGCC GGACGCGCCC GTCGCGACGG TCGAGGTCCG GCTCGCCTCC
GCCGGGCTGG CGCGCGCGCG GCTCGTCGTC GTCGCGACGT TCCTCGCCGC GCTCGTCGCG
GGCGTGCTCG CCGCGGCCGC GGTGGGGGCC TTCCTCGCCT CGCGCGTCAC GCGGCCCGTC
GAGGCGCTGC GCGCCGCCGC GCTGCGGGTC GCCGCGGGCG ACCTCGGCGC CCGGGTCGAG
GCGCGCGCCA CGGGCGAGGT GGCGGAGCTC GTGCGCGCGT TCAACGCGAT GACCGCCGAC
CTCGCGGCGA GCCGCGCCCG TCTCGCGCAG GCGGAGCGCG TCGCCGCCTG GCGCGAGGTG
GCGCGACGGC TCGCCCACGA GATCAAGAAC CCGCTCACCC CCATCGCCAT GAGCGTCGAG
ACGCTGCGCG ACGCGCACGC CCGCGCGCGG CCGGACTTCG GGGAGATCTT CGACGAGGGG
ACGCGCGCCA TCGGCGAGGA GGTCCGCCGG CTGAAGCGCA TCGTCGACGA GTTCAGCCGC
TTCGCCCGGC TGCCCGCGCC CGAGCGCACC CCGGTCGCGC CCGACGAGCT CGTCCAGTCG
GTGCTCGCGC TCTTCCCATC GGCGCCGGCC GGCGTGGTCG TCGCGCGCGA GGTCGAGGCG
GGGCTCCCCG CGGTGCTGGC CGATCGCGAC CAGGTGGTGC AGGTGCTGCT CAACCTCGTG
CGGAACGCGC TCGACGCGAT GCCCGGCGGC GGCACCCTGC GCGTCGCGGC GCGCGGCGAG
GGAAGCGCGG TGGCGTTCTC GGTGTCCGAC ACCGGCCCGG GAGTGCGCCC GGAGGACCGG
CCGCGCGTCT TCGAGCCCTA CTTCACCACG AAGGAGGGCG GCACCGGGCT CGGCCTCGCC
ATCGCGCAGC GGATCGCCGA GGAGCACGGC GGCACGCTGG AGCTCCGGTC GGCGCCAGGC
GAGGGCGCGA CGTTCACGCT GACCTTGCCG GCGGTGTCCT GA
 
Protein sequence
MMLRTRLALA FALFAAVPLA AALWPVSHAL SGALSTEHAA RLDGAARALD GELARLAREA 
GTAVDELARS ADAEALAREL GTGALAPADA APRAREWMEA RGLDVLAVAE PDGRVVSSGH
LPGRAGDVDA EVAALLATPP SRAAPHRVMR AGPDGVEPVL ALVAWAPVPG DPLRVAGGLA
LGPERAARLA ALTGGAIAIR APDGALLADA AAPGSPASGG APDLADRLSA RLGALGTPVR
SLALGPPDAP VATVEVRLAS AGLARARLVV VATFLAALVA GVLAAAAVGA FLASRVTRPV
EALRAAALRV AAGDLGARVE ARATGEVAEL VRAFNAMTAD LAASRARLAQ AERVAAWREV
ARRLAHEIKN PLTPIAMSVE TLRDAHARAR PDFGEIFDEG TRAIGEEVRR LKRIVDEFSR
FARLPAPERT PVAPDELVQS VLALFPSAPA GVVVAREVEA GLPAVLADRD QVVQVLLNLV
RNALDAMPGG GTLRVAARGE GSAVAFSVSD TGPGVRPEDR PRVFEPYFTT KEGGTGLGLA
IAQRIAEEHG GTLELRSAPG EGATFTLTLP AVS