Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3032 |
Symbol | |
ID | 5374500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 3531322 |
End bp | 3532920 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640844557 |
Product | NifA subfamily transcriptional regulator |
Protein accession | YP_001380213 |
Protein GI | 153005888 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGAGAGC GGGTGCGCAT GCCCGGCCGC GAGGCGCGCG AGGTCCAGGC CCTCCACGAC GCCGCGCGCG TCCTGTGGCT CGCGACCGAT CTCCGCGAGG CGCTGGACGC CACGCTGTCG GTGCTCCAGC TCGAGCTCGG GATGGAGAAC GGGACCCTCT CGCTCTTCGA CCCGGTGACG GGCGAGGTGT TCATCGAGGC CGCGCCGGAG ATGCGCGACC GGGAGCGGAT CCTCGGGAGG CTACGGCCGG GGGAGGGGAT CGTCGGACGG ATCTTCGCGA CCGGCATGCC GATGGCGGTG CCGGACATCG GCAGCGAGCC CCTGTTCCTG AACCGGACCG GCACCTGGCG CGACCTCGAC GCCGAGCCGC GGGCCTTCCT CGGCGTCCCC GTCCGCCACG GGCGGACCAC CCTCGGCGTG CTCACCGTCG ACCGGCGCCA CGGCGCGGGG CCGATCTCCT TCGAGCGGGA TCTCCGCTTC CTCGAGATCC TCGCGGGCAT GGTGGGCGCG CGCGTCCGGC TGCAGGAGCT CGAGAACCCA CGGCGGCGGG CGGTGCTGGA GGAGGAGGCG GGCGCGCCCG AGGCCCGGCT GCCCGGGATC GTCGGCGTGG GTCGGGGGAT GCGCGAGGTG CTGGAGCGGG TCGAGCGCGT GGCGCGGAGC CGTGCGACCG TGCTCGTGCG CGGCGAGAGC GGCACCGGCA AGGAGCTCGT CGCGCGGGCG CTTCACGAGG CGAGCCCCCG CACCGGCCGG CCGTTCGTGG CCCTGAACTG CGCGGCGCTC CCCGAGGCGC TCCTCGAGAG CGAGCTGTTC GGCCACGAGA AGGGCGCGTT CACGGGGGCG GCCGCGGGCA CCAAGGGCCG CTTCGAGCTG GCCGACGGCG GGACGCTGTT CCTCGACGAG GTCGGCGAGC TGTCGCTCTC GGCGCAGGCG AAGCTGCTGC GCGCCATCCA GGAGCGCCAG TTCGAGCGGG TGGGGGGGCG CCGCGCGGTC ACCGTGGACG TCCGCATCGT CGCCGCGACG AACCGCGATC TCGACGCGGC GGTGCGGGCC GGCGAGTTCC GCCTCGACCT GTTCCACCGC CTGTCGGTGG TGACGGTGCT GCTCCCGCCG CTGCGCGAGC GGCGCGAGGA CGTCCCGGCG CTGGCGGAGC ACCTCCTCCG GGAGCTCTCC GAGGAGAACG GGCGCGAGGT GCGGCTGGGC GCGGACGCGC TGGACGCGCT GCTCGCGCAC GACTGGCCGG GCAACGTCCG GCAGCTCCGC AACGTCCTCG AGGCGGCGGT GGTCTCGACG GAGGCGTCGC TGCTGCGCGC CGCCCACCTC GGCCTGGGCC GAGCCGCGGC GCAGGCCGCC GCGGCCGAGC CGTGCGCGCG TGATCGGGAG CAGTCCGCCG GCGGCGCCGG GGCCGTCCAG CCGCCGGCGG AGGACGGCGT CGCGGAGGCC GGCGTCGGGG AGGACGGCGG CCGGGAGGAG CGGGAGGTGC GCGACGCGCT CGCGCGCGCC GGCTACGTGA AGGCCAAGGC GGCGCGGCTC CTCGGCATGA CCGTCCGGCA GCTCGACTGG CGCGTCCGCA AGTACGGCAT CGCCGTCGAG CGGTTCTGA
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Protein sequence | MRERVRMPGR EAREVQALHD AARVLWLATD LREALDATLS VLQLELGMEN GTLSLFDPVT GEVFIEAAPE MRDRERILGR LRPGEGIVGR IFATGMPMAV PDIGSEPLFL NRTGTWRDLD AEPRAFLGVP VRHGRTTLGV LTVDRRHGAG PISFERDLRF LEILAGMVGA RVRLQELENP RRRAVLEEEA GAPEARLPGI VGVGRGMREV LERVERVARS RATVLVRGES GTGKELVARA LHEASPRTGR PFVALNCAAL PEALLESELF GHEKGAFTGA AAGTKGRFEL ADGGTLFLDE VGELSLSAQA KLLRAIQERQ FERVGGRRAV TVDVRIVAAT NRDLDAAVRA GEFRLDLFHR LSVVTVLLPP LRERREDVPA LAEHLLRELS EENGREVRLG ADALDALLAH DWPGNVRQLR NVLEAAVVST EASLLRAAHL GLGRAAAQAA AAEPCARDRE QSAGGAGAVQ PPAEDGVAEA GVGEDGGREE REVRDALARA GYVKAKAARL LGMTVRQLDW RVRKYGIAVE RF
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