Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_2695 |
Symbol | |
ID | 5375811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 3119579 |
End bp | 3120886 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640844222 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001379880 |
Protein GI | 153005555 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0516695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.123815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCA GATTCGTCGC CGTCCTCGCC CTCGTCCCCG CCGCGGCGCT CGCGCAGTCC GGGGCCCTCG ACGCGGCCAG CGCCGCCGCA GAGGCGGCGG GCGCCGACGC GGCCCGGATC GAGGCCGCGG CGGCCGCGCC GGCCGAGGAG TCGGCCGCGC CGTCCGCGGA GGCCGCGCCC GAGGCTGGCG CCCCCGCGCC GGTCGTCACG GGGGACGTGG TCGCGCTGGA GGACGGCTCG AGGGGCGAGT CGACGCCCGA CACGTACACG ATCCGCCCCG GCGACACGCT GTGGGATCTC TCCGGCCGCT ACCTCAACAA CCCCTGGTAC TGGCCGAAGA TCTGGTCCTA CAACCCGGAC ATCGAGAACC CGCACTGGAT CTACCCCGGC AACCTGCTCA GGTTCTTCCC GGGCGCCGAC GAGGCGCCGA CGCGGGTCGA GCCCGCCGGC GCCGAGCTGG TCGCGGAGGC GGAGGAGCCT GCGCCGGCGC GGGAGCTCGA GGACTTCTCC CGCGCGAACA TGAAGGGACC GGAGAGCGTG GACGACGACA CGGTGGCGGT CGCCGGCCCC TACAAGATCG GCTACGTCGC TCCGCGCGCG CTCCTCGCCC GCCACGACAC GTTCGTCACG CCGCGCCAGC TCGCCGAGTC GGGCTCCATC TCCGCCGCGT TCGAGGAGAA GCTCCTCCTC GCCAACCTCG ACAAGGCGTA CGCGCGGTTC GAGACCCGGG CCGGGGTGAA GGAGGGCGAG ACGTACGTGG TCTACAAGAC CGAGCGCCCG ATCCGCCATC CGCGTACCGG CGAGCTCTTC GGCTGGCAGT CCACGGTGCT CGGCGCCGCC AAGGTGGTCG CGGTGGACTC GAAGGCGGCG ACGCTCGTCA TCACCCAGGC CTTCGAGCCG ATCGAGCGCG GCGCCATGCT GGGCCCCTGG ACGGAGCGGT TCCTCCACCG CGTCGATCGC CGCGCCAACC GGCGCGCGCT CGAGGGGACG ATCGTCGGAG GCCAGGTCCA GGTCGTGACC CAGCTCGGCG AGCACCACGT CGTCTTCATC GACCGCGGCG CGGCCGACGG CGTCGAGGAG GGGAACGTCT TCACGGCCGT CCGCGCCGGC GACCCCTACG GCCGCGCCCC CGGCATGCCC GAGTGGGACC CGAACCTGCC CAAGGAGGAC GTCGGGGAGA TGCTCGTCAT CGACGTGAAG GAGCGCGCCT CGGTCGCGCT CGTCACGCGC AGCATGCTCG AGCTCGCCAT CGGCGACCGC GTCGAGATGC GCGCCCAGGC GGCGAGCGAC GGGGCGGGCG GTCGCTAG
|
Protein sequence | MIRRFVAVLA LVPAAALAQS GALDAASAAA EAAGADAARI EAAAAAPAEE SAAPSAEAAP EAGAPAPVVT GDVVALEDGS RGESTPDTYT IRPGDTLWDL SGRYLNNPWY WPKIWSYNPD IENPHWIYPG NLLRFFPGAD EAPTRVEPAG AELVAEAEEP APARELEDFS RANMKGPESV DDDTVAVAGP YKIGYVAPRA LLARHDTFVT PRQLAESGSI SAAFEEKLLL ANLDKAYARF ETRAGVKEGE TYVVYKTERP IRHPRTGELF GWQSTVLGAA KVVAVDSKAA TLVITQAFEP IERGAMLGPW TERFLHRVDR RANRRALEGT IVGGQVQVVT QLGEHHVVFI DRGAADGVEE GNVFTAVRAG DPYGRAPGMP EWDPNLPKED VGEMLVIDVK ERASVALVTR SMLELAIGDR VEMRAQAASD GAGGR
|
| |