Gene Anae109_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2506 
Symbol 
ID5376910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2903515 
End bp2905101 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content74% 
IMG OID640844025 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_001379691 
Protein GI153005366 
COG category[H] Coenzyme transport and metabolism
[E] Amino acid transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000305441 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTGGCGC GCGTACTCGT GTCGGACGAC CTGTCGCCGG AGGCGGTGCG GATCCTCCAG 
GAGGCCGGGC TCGAGGTGGA CGTGAAGGTC GGGCTGAAGC CCGACCAGCT CGAGCGGATC
GTCGGCGACT ACGACGGCCT CGCCGTCCGC AGCGCGACGA AGGTCACCGC TCAGCTGCTC
GACAAGGCGG CGCGGCTGAA GGTGATCGGG CGCGCCGGGG TGGGGGTCGA CAACGTCGAC
CTCGCCGCGG CCACGCGCCG TGGCGTCGTC GTGATGAACA CGCCCGGCGG CTCGTCCATC
ACCGTGGCGG AGCTCGCGCT CTCCATGATC CTCGCGCTCT CCCGCCACGT CGCCGCGGCG
ACGGGGAGCG TCAAGGCGGG CAAGTGGGAG AAGAAGCGGT TCCAGGGACA CGAGCTCGCC
GGCAGGACGC TGGGGGTCGT CGGCATCGGG AACATCGGCT CGGTGCTGGT CGCGCGCGCC
GTCGCGCTGG GGATGCGCGT CGTCGCCTTC GACCCGTTCA TCTCCGCGGA GGCCGCCGCG
AAGCTCGGCG CGAGCCTCGT GGATCTCGAC ACGCTCTGGC GCGAGGCCGA CGTCGTCTCC
ATCCACGTGC CGCTCACGGA CAAGACCCGC CACCTCGTGG ACGCGACCGC CCTCGGCAAG
ATGAAGAAGG GCGCCCTCCT CGTGAACTGC GCCCGGGGCG GGATCGTGGA CGAGCGCGCC
CTCGCGGACG CGCTGCGCTC GGGGCAGCTC GGGGGCGCCG GGCTCGACGT GTTCGAGCAG
GAGCCGCCGC CCGCGGACCA CCCGCTGTAC GGGCTCGAGA ACGTCATCCT GACGCCGCAC
ATCGGCGCCT CGACCGAGGA GGCGCAGTCG GCCGTCGCCG TGGCGGTCGC CGAGCAGCTC
GCCGACTACC TCGTGCGCGG CGTCGTGCGC AACGCGGTGA ACGCGCCGGG GCTGCCGCCG
GAGGTGATGG AGCAGCTCGC GCCGTACCTG CCCCTCGCGC AGAAGCTCGG CGCGCTGGCG
GCGCAGCTCG CGCCGCAGGG GCCGAGCGAG GTGACCATCG AGGTGGCCGG GGAGCTGGCG
GCGGTGCCCA TCCGCCCGCT CGCGGCGCGC ACGCTCGTCG GGATGCTCGG GCCGGTCCTC
GACACTCCGG TGAACGAGGT GAGCGCGCCG GCCATCGCCC GCGAGCGAGG CCTGGTGGTG
CGCGAGGTCC GCTCCGCCGA GCTCCACGAC TACGCGAGCC TCGTCACCGT GACCGTGCGC
GGCGCGGTCG GCCAGGCGGA GGTCGCCGGG ACCGTGTACG GGAAGCGCGA GGCGCGGGTG
GTGCGCGTGA ACGCGTTCCG CGTCGAGGCC GTCCCGGACG GGAACGTGCT CCTCTGCGAG
AACGACGACG CGCCGGGGGT GGTGGGGAAC CTCGGGACGA CGCTCGCCGC GGCGGGCGTG
AACATCGCGC AGATCTCGCT CTCGCGCCTG GAGGACCGCT CGGGCGCGTT CGCCTTCCTG
AACGTCGACT CGCCGCCCTC GGCCGAGCTC CTGGAGAAGG TGCGCAAGCT GCCGCACGTC
CGCTCCGCGC GGGCGATCGT CCTGTGA
 
Protein sequence
MVARVLVSDD LSPEAVRILQ EAGLEVDVKV GLKPDQLERI VGDYDGLAVR SATKVTAQLL 
DKAARLKVIG RAGVGVDNVD LAAATRRGVV VMNTPGGSSI TVAELALSMI LALSRHVAAA
TGSVKAGKWE KKRFQGHELA GRTLGVVGIG NIGSVLVARA VALGMRVVAF DPFISAEAAA
KLGASLVDLD TLWREADVVS IHVPLTDKTR HLVDATALGK MKKGALLVNC ARGGIVDERA
LADALRSGQL GGAGLDVFEQ EPPPADHPLY GLENVILTPH IGASTEEAQS AVAVAVAEQL
ADYLVRGVVR NAVNAPGLPP EVMEQLAPYL PLAQKLGALA AQLAPQGPSE VTIEVAGELA
AVPIRPLAAR TLVGMLGPVL DTPVNEVSAP AIARERGLVV REVRSAELHD YASLVTVTVR
GAVGQAEVAG TVYGKREARV VRVNAFRVEA VPDGNVLLCE NDDAPGVVGN LGTTLAAAGV
NIAQISLSRL EDRSGAFAFL NVDSPPSAEL LEKVRKLPHV RSARAIVL