| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2301 |
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| Symbol | rpsA |
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| ID | 5376103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | - |
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| Start bp | 2606604 |
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| End bp | 2608340 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640843820 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001379487 |
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| Protein GI | 153005162 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.75877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGA CAAAGGTTGG TCTTTACCGA ATGGAGAACC AGACTCCCCG TACGCCCGAA
ATCGAGACCG AGGACTTCGC GACGCTCTTC GCGCAGAGCG AGGCGCAGGC CGGTCCCATC
GAGGAGGGCA AGGTCGTCCC TGGCACCGTC ATCGCGCTCT CCAAGGACTA CGCCGTCATC
GACATCGGCT ACAAGTCCGA GGGCCAGGTG CCGATCTCCG AGTTCATCTC GGCGCCCGGC
GGCGAGCCCG CCGTCAAGGT CGGCGACAAG GTCGAGGTGC TCGTCGAGTC CCGGGAGAAC
GACACCGGGA TGGTCGTCCT CTCCAAGGAG AAGGCCGACA AGATGCGCAT CTGGGACGAG
ATCTCCGCCG CGTGCGAGCG CGACGAGCTC GTCGAGGGCG TGATCGTCGG CCGCGTGAAG
GGCGGCCTCT CCGTCGACAT CGGCGTGAAG GCGTTCCTCC CCGGCTCGCA GGTCGACATC
CGGCCGGTGC GGAACCTCGA CAAGCTGATC GGCGAGAAGT TCAAGTTCAA GGTCATCAAG
TTCAACAAGA AGCGCGGCAA CATCGTCCTG TCGCGCCGGG TCCTCCTCGA GAAGGAGCGC
GAGGAGCTCA AGAAGGAGAC CCTGAAGAAC TTGAAGGAGG GCGCGATCCT CAAGGGCCAG
GTGAAGAACC TGACCGACTA CGGCGCCTTC ATCGACCTCG GCGGCATCGA CGGCCTGCTC
CACGTCACCG ACATGAGCTG GGGCCGCATC GGCCACCCGT CGGAGATGTT CGAGGTCGGC
CAGGAGGTCC GCGTCGTCGT CCTCAAGTTC GACCCGGCCT CCGAGCGCGT CAGCCTCGGC
CTCAAGCAGA TCCAGGAGGA CCCGTGGCAC CGCGCCGACG AGAAGTATCC GGTCGGCACG
CGCGTCAGGG GCAAGGTCGT CTCGCTCACC GACTACGGCG CGTTCATCGA GCTCGAGCAG
GGCGTCGAGG GCCTCGTCCA CGTCAGCGAG ATGAGCTGGA CGAAGCGGGT GAAGCACCCG
TCGAAGCTCG TCAACCAGGG CGATCAGGTC GAGGCGGTCG TGCTCGACAT CGATCCGAAG
GCGAAGCGGA TCAGCCTCGG CATGAAGCAG ATCGAGGCGA ACCCGTGGAC GCTGCTCGAG
GACAAGTATC CCATCGGCAC GACCATCCGC GGCGAGGTCC GGAACGTCAC CGACTTCGGC
GTGTTCGTCG GCGTCGAGGA GGGCATCGAC GGCCTCGTGC ACGTGTCCGA CATCTCCTGG
ACCGAGCGCA TCAAGCACCC GGGCGACAAG TTCAAGAAGG GTGACGTGGT CGAGGCGGTG
GTGCTCAACA TCGACGTCGA GAACGAGCGC TTCAGCCTCG GCATCAAGCA GGCCCACGTC
GATCCCTGGA CGACGCTCTC CGAGCGCCAC CCGGTGGGCG CGCGCGTGAA GGGCAAGGTG
ACGAAGGTCA CCGACTTCGG CGCGTTCGTC GAGATCGAGC CGGGCATCGA GGGCCTCGTC
CACGTCTCCG AGATGAAGGA CGAGCGCGTC GAGAACCCCC GCGACGTCGT GACCGAGGGC
CAGGAGGTCG AGGTCAAGGT CATCGACATG GACCTCCACG AGCGCAAGAT CGCGCTGTCG
ATCAAGCAGC TCAACCGCGA CGGCGGCGAG GAGGACTACC GCGAGTACCT GCGCCGTCAG
GGCGACGGCC GCGCGCGGCT GGGGGACCTC ATGGAGAAGT TCAACCGCAG GAAGTAG
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| Protein sequence | MIPTKVGLYR MENQTPRTPE IETEDFATLF AQSEAQAGPI EEGKVVPGTV IALSKDYAVI
DIGYKSEGQV PISEFISAPG GEPAVKVGDK VEVLVESREN DTGMVVLSKE KADKMRIWDE
ISAACERDEL VEGVIVGRVK GGLSVDIGVK AFLPGSQVDI RPVRNLDKLI GEKFKFKVIK
FNKKRGNIVL SRRVLLEKER EELKKETLKN LKEGAILKGQ VKNLTDYGAF IDLGGIDGLL
HVTDMSWGRI GHPSEMFEVG QEVRVVVLKF DPASERVSLG LKQIQEDPWH RADEKYPVGT
RVRGKVVSLT DYGAFIELEQ GVEGLVHVSE MSWTKRVKHP SKLVNQGDQV EAVVLDIDPK
AKRISLGMKQ IEANPWTLLE DKYPIGTTIR GEVRNVTDFG VFVGVEEGID GLVHVSDISW
TERIKHPGDK FKKGDVVEAV VLNIDVENER FSLGIKQAHV DPWTTLSERH PVGARVKGKV
TKVTDFGAFV EIEPGIEGLV HVSEMKDERV ENPRDVVTEG QEVEVKVIDM DLHERKIALS
IKQLNRDGGE EDYREYLRRQ GDGRARLGDL MEKFNRRK
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