Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_2060 |
Symbol | |
ID | 5376724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 2331410 |
End bp | 2335030 |
Gene Length | 3621 bp |
Protein Length | 1206 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640843573 |
Product | WD40 domain-containing protein |
Protein accession | YP_001379247 |
Protein GI | 153004922 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.456517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.995925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCAC CCCCTCGCAT GGAGCCTGCT GCGACGCACG CCGGGACGGG CTCCACGAGA GCCTCCTTCG CCTCGCCGAG ATCGGGGTGC TGCGAGCGCC CCCTGCGCCG CGCGCTCCTC CTCGTCGCGC TCCTCGCCGC GCTCGTGCCC GCGCGCGGCG CGCCGCAGCC CTACGATCCG CGCTACCGCT GGCACACCCT CGACACGCCG CACTTCCGCG TGCACTTCCA CCAGGGGGAG GAGGCGCTCG CGCAGGACGT CGCGCGCGCC GCCGAGCGCG CGCACGCGGC GCTGACCCCA CTGCTCGGGT ACGAGCCGCG GCGCACCGAG GTGGTGCTCT CCGACGACGC CGACGACGCG AACGGCTCGG CGACGCCGCT CCCCTACGAC ACGGTCCGGC TCTACGCGGT CCCGCCGTCC TCGTTCTCCG AGCTGAACGA CTACCGCGAC TGGCTCGACG CCCTGGTCTT CCACGAGTAC GTCCACATCC TCCACCTCGA CCGGATCGGC GGGTTCCCGG CGCTCTTCAA CCGCGTGTTC GGCAAGCTGC TCGTGCCGAA CGGGCTCGTG CCGCCGTGGA TGGTGGAGGG GCTCGCGGTG CTGCACGAGT CGAACGGCGA CCCCGAGACG GGCCGCAACG CGAGCGCGTT GCACGCGATG TACGCGCGCT CCCTCGCGCT GGAGCCGCCG GGGTTCCCGC CGCTCGACGA CGCCTCGAAC CCGCTGCTCG AGTGGCCGGT GGGGACCGCG CCCTACCTGC TCGGCGGGCG CTTCATGGCC TACCTCCAGG CCCGCTACGG CGACGGCGCG ATCGCGGGCT ACGTCGGCCG GCAGGGCGCG CAGCTCTGGC CGTACGCGCC GTCGTGGGTG GGGCGCCGGT TCTTCGGCGG CCGAACCTTC GCCCAGCTCT GGGCGGAGTA CGCGGACGCC GAGCGGCGCC GCGCCGAGGA GGTGGTGGCC GCGGTGCGCG CGCGGCCCGT CACCCGCCCC CGCCGGCTGA CCACCCGCGG CGGCCGGGCC GAGAACCCTC GCTGGAGCCC AGACGGCACG TTCCTCGCCT ACTGGCGGCG CCCGCTCGAC GGACGGCCCG CCCTCTACCG GGTGTCACCC GACGGGAGGG ATCTCGGCGC CGTCACGACG GTGGACGCGA ACGGGACGCT CACCCTTCGG TCGCCTGACC AGGCGATCGC GGCGATCGGC GAGGTGCACC GCGAGTACCG GGTCTACGAC GATCTCCACC GCGTGGATCT GCGCACCGGC CGCCGCACTC GGCTCACGCG CGGCGAGCGC GCCACCGATC CCGACCTCGC GCCCGGCGGC GCGTTCCTCG CGTACGTGCA GCGCACCGGT CCGGGCGCGC TCGCGCTCGT GCGCCGTCCC CTCGACGCCG CCGGCCGGCT CGGCGCGCGC GAGGTGCTGT TCTCGCGGCG CGGCGCGGAG GTGTACCAGC CGCGCGTCTC ACCCGACGGA CGCCGCATCG CGTTCGAGCT GCAGGAGGAG GGACGGCGCG ACCTCGCGCT GTGGGAGGAC GGCCGCGTCA CGCGCATCAC CGACGACGGC GCCCTCGACA CCTCGCCGGC GTGGACGCCC GACGGCCGCC ACCTGCTCTT CGCCTCCGAC CGCGGCGGCC TCTACAACCT GTACGCCTGG GAGGCCGCGA CCGGCGACGT CGCGCAGGTG ACGAACGTGG AGACGGGAGC GCTGCAGCCG GACGTCTCGC CCGACGGCCG GACGATCGCG TTCCTGCTCT ACTCGCGCGC CGGGTACGAC GTCGCGACGA TCCCGTTCGC GCCGGAGGGC TGGCTCGAGC CGTTGCCGGC GGAGCCCCGC CCCGCGACGG CAGCCGCTCG CCCTGAGCCT GTCGAAGGGA GGGCGGCGCC GGACGCAGCG GGATCCCTCG CGACCTCGAA CCCGACCGCG ACCTCGGTGC CGGCATCGCC GGGGAAAGAG GCCGCTCATC CCGAGCGTAG CGACTCCGCG TCAGCGGAGG CGCGTAGTCG AGGGACGACC CCGACCTCGA CTCCGACCCC GATCCCGACC CCGACCCCGA CCGCGACCGC GACCGCGACC GCGACCTCGA CCCCGACCTC GACCTCGACC TCGACCGCGA CCGCGACCCC GACCGCGACC CCGACCGCGA CCCCGACCCC GACCGCGACC CCGACCGCGA CCCCGACCGC GACCTCGACC CCGACCGCGA CCTCGACCCC GACCCCGACC CCGACCGCGA CCGCGACCCC GACCTCGACC TCGACCTCGA CCGCGACCCC GACCTCGACC TCGACCGCGA CCTCGACCGC GACCCCTGTG CCGGAATCGC CGGAGAAAGA GGCCGCTCAT CCCGAGCGTA GCGACTCCGC GTCAGCGGAG GAGCGTAGTC GAGGGACGAC CGCGACCCCG ACCGCCAACC CTGTGCCGGA ATCGCCCGGG AAAGAGGCCG CTCATCCCGA GCCCGTCCCC TCCGACCTCC CCTCCCGCCG CTACCGCGCC CTCGACACGC TCGGCCCGAC CTACTGGCTC CCGTTCCTGG CCGCGGACGC GGCCGGCACG GTCTTCGGCG CGACGACCGG CGGCGCGGAC GTGCTGCGCC GGCACGCCTG GGCGGCGCAG GCCTTCTGGA GCACCCAGAC GCAGGAGCCC GGTTACGCCG TCGCGTACCA GGGTGGCTGG TCCTGGCCAC GGCTCGATCT CTCGTCGTCG CGCTTCGTCG GCGACTCTCC CGACCCCGGC GATCGACTCC TCTCCGTGTG GACGCTCGCC GACGCCGGCG CGACGTTCAC GTTCACCCGC CTCTCCCGCG CGCTGGCGCT GCGGCTCGGC TGGAGCGGCA CGCGCTACGA CACGCTCGAG GGCGAGCCCG GCCCCGACCC GCGGCTCCCC TTCCCGTTCG AGGACGGCTT CCTGTCGGAC GTGTCGCTCC TGCTCTCGTA CTCGGACGCG CGCCGCTTCG TGCGCTCCAT CTCGCCCGAG GAGGGCCGGA GCGCGGCGGT CAGCCTGAGC TACGCCGGGT CCGGCACCGG CAGCGACTAC GACCTCGCAC GTGTGAGAGG GTCGGTCGGG CAGTACCTGC GGGTCCCCGG CCTGGGCCGG ACCGTGCTCG CCCTCCGGGC CTCCGGCGGC CTCGCGCGCG GCACGCTCGG CGGCCGGGAG CCGTACGAGC TGGGCGGGGT CCCGCAGCCG AGCCTGCTCT CCGTCGCGCT CGGCTCCGGC ATGCCGCCCG ACGCGCTGCG CGGCTACGAC GTGGGGACCT TCGAGGGCAC CGGGTTCGTC CTCGCCAACG CCGAGCTGCG GTTCCCGCTC GGCGCGCCCG AGCTGGGGCG CACGACCTGG CCGCTCTTCC TGCGGCGGCT GCACGGCGCG GTGTTCGCGG ATCTCGGCGA GACCTTCGAT CGGCCGGGCG AGCCCATCCT CGCCGGCAAC CCGCTCGACG CCGGCGCGCT CCGGCTCGGC CTCGGCGCGG AGCTCCGCCT CGAGCTCGTG CTCGGCTACT ACATCCGCAC CGACCTGCGC CTCGGGCTCG CCCGCGCGAT GGGGGCGCCC TTCGACGGCT GGCGCGCGGC GGACGAGGCG ATCGCGCCCG ACGAGGTCTA TCCCTACGTC GTGCTCGGCG CGTCGTTCTG A
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Protein sequence | MAPPPRMEPA ATHAGTGSTR ASFASPRSGC CERPLRRALL LVALLAALVP ARGAPQPYDP RYRWHTLDTP HFRVHFHQGE EALAQDVARA AERAHAALTP LLGYEPRRTE VVLSDDADDA NGSATPLPYD TVRLYAVPPS SFSELNDYRD WLDALVFHEY VHILHLDRIG GFPALFNRVF GKLLVPNGLV PPWMVEGLAV LHESNGDPET GRNASALHAM YARSLALEPP GFPPLDDASN PLLEWPVGTA PYLLGGRFMA YLQARYGDGA IAGYVGRQGA QLWPYAPSWV GRRFFGGRTF AQLWAEYADA ERRRAEEVVA AVRARPVTRP RRLTTRGGRA ENPRWSPDGT FLAYWRRPLD GRPALYRVSP DGRDLGAVTT VDANGTLTLR SPDQAIAAIG EVHREYRVYD DLHRVDLRTG RRTRLTRGER ATDPDLAPGG AFLAYVQRTG PGALALVRRP LDAAGRLGAR EVLFSRRGAE VYQPRVSPDG RRIAFELQEE GRRDLALWED GRVTRITDDG ALDTSPAWTP DGRHLLFASD RGGLYNLYAW EAATGDVAQV TNVETGALQP DVSPDGRTIA FLLYSRAGYD VATIPFAPEG WLEPLPAEPR PATAAARPEP VEGRAAPDAA GSLATSNPTA TSVPASPGKE AAHPERSDSA SAEARSRGTT PTSTPTPIPT PTPTATATAT ATSTPTSTST STATATPTAT PTATPTPTAT PTATPTATST PTATSTPTPT PTATATPTST STSTATPTST STATSTATPV PESPEKEAAH PERSDSASAE ERSRGTTATP TANPVPESPG KEAAHPEPVP SDLPSRRYRA LDTLGPTYWL PFLAADAAGT VFGATTGGAD VLRRHAWAAQ AFWSTQTQEP GYAVAYQGGW SWPRLDLSSS RFVGDSPDPG DRLLSVWTLA DAGATFTFTR LSRALALRLG WSGTRYDTLE GEPGPDPRLP FPFEDGFLSD VSLLLSYSDA RRFVRSISPE EGRSAAVSLS YAGSGTGSDY DLARVRGSVG QYLRVPGLGR TVLALRASGG LARGTLGGRE PYELGGVPQP SLLSVALGSG MPPDALRGYD VGTFEGTGFV LANAELRFPL GAPELGRTTW PLFLRRLHGA VFADLGETFD RPGEPILAGN PLDAGALRLG LGAELRLELV LGYYIRTDLR LGLARAMGAP FDGWRAADEA IAPDEVYPYV VLGASF
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