| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1859 |
|---|
| Symbol | |
|---|
| ID | 5376633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 2123479 |
|---|
| End bp | 2125068 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640843367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001379046 |
|---|
| Protein GI | 153004721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03382] Myxococcales GC_trans_RRR domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.956553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCACTC GCAGCCACAT GGCCGCGCTC GCGCTGGCGC TCGTCGCGCC TTACGTCGCG
CGCGCCACGC CCATCGGAAC GTTCACCTGG ATCGCGTCGG GGCCGGGCGA CCAGACGGAT
CCCGCCATCG ACGGGCGCTA CGTGCTGTAC GCCGACGGCA CGCGCGGCAG CCTCGATGTG
CTCGCGCGCG ATCTCGCGAC CGGCGAGACG CGGGTGGTCG CGGCCGGTCC GGACGACGAG
GACAGCCCGG ACCTCGCGCG CTCGGTGGTC GCGTACCGCA CCGACGCCGG CATCACCGTG
GCGTACCTCG CGACGGGGAC GCTCCTCCGT CCTCCGGCGG AGCCCGGGGC GCGTGCGCCG
GCGGTGTCCA CCTCCGCCGC GGTCTGGGAG GTCGGGCGCG ATGGCGCTCG CGACCTCGGA
TGGTTCCTGT TCGGGAGCGG AGCGCCGCGG AGCGGCGTCG TCGCCGCCCC TGGCGATCAG
CGCGCGCCGG CGGTGAGCGG GACCACCGTC GCGTACGTGG ACGCGGCGGC CGGCGGCGCC
GTCCGGCTGC TCGATCTCGC GCGCGGCGAG GCCCGCGTCG TCTCGCCCGG CGGCGCCACG
GGGGTGGCGA TCGACGGCGG ACCGGGCGCG CTGCGCGTCG CGGTCACGCG CGCCGTCGCG
GACACCTCGA CCGACGTCGA GGTCTACGAC GGCGCGGGCC AGCTCCTCGC CGCGCTGCCG
CTCCCGGGCG AGCAGCGGCG CCCGCGCCTC TCGGGCGAAT GGGTCGCCTT CGAGGACCTG
TCGTCGGGCC GCTCGCAGGT CGTCCTGTGG GCGTGGCGCA GCGGGCTCGT CCACGCGCCG
CGCCCGTACG CAGGCGAGCA GCTCCTGGGC GACCTCGCCG CGGACGACGA CGCCGTCAGG
GTGGCGTTCT CGGAGCGAAC CTCGGGAGGG CTGGACGTCG GCCTCTACAC GCTGCCGCTC
CCCGTCGCGG ACGATGGAGC GAGCGGCATT CGCTGCGACT CTCCGGGGGC CCTGGTCCTC
GCGGAGCTGA CGCTCACGCG CGGCACGGGC GCAGTGACCA CGGGCGCGGT GGCGTTCGCC
GGCGGCGACG GCGCCGACCT GCCCATCCTG GTGTGCATCG ACGCCGCGAA GGTCTCCTCT
GCCTGGGCCA CGCTCGACGG CGCGGCGCTG GCCGTCCCGG GGGACTTCGC CTCCGGCAGC
GCGCACCTCG AGCTCCGTCG GATCGCGCGG GGAGGCGAGG GGCTCCTCGA GGCGGGAGTG
GAAGGGAAGC GCGGCGCGTC CCTGCGCGTG CGCGTGCTCG CGGAGCCCGT GCCCGACGGT
GGCCAGGACC CGGGGGCGCC GCCCGACGAT CCGGGCCAGG GGCCCGGCGA CGGCGGGCCT
GGCGGTGACG ACGACGGCGA CGACGGCTCC GACGAGGAGC CAACGCCTAC GGTTCCTGGC
GACGGTGACG ACGACGCGCC CGGCGGCGAG GACGAGCAAG ACGGACCGAC GCTTCCCGGG
CGAGGCGGCT GCGCGAGCGG CGGCGCCGAT GGGCTGGCGA TCGCCGGCGC GCTGGCGCTG
CTGCGGCTGC GCCGGCGCAC CCGGGCCTAG
|
|---|
| Protein sequence | MLTRSHMAAL ALALVAPYVA RATPIGTFTW IASGPGDQTD PAIDGRYVLY ADGTRGSLDV
LARDLATGET RVVAAGPDDE DSPDLARSVV AYRTDAGITV AYLATGTLLR PPAEPGARAP
AVSTSAAVWE VGRDGARDLG WFLFGSGAPR SGVVAAPGDQ RAPAVSGTTV AYVDAAAGGA
VRLLDLARGE ARVVSPGGAT GVAIDGGPGA LRVAVTRAVA DTSTDVEVYD GAGQLLAALP
LPGEQRRPRL SGEWVAFEDL SSGRSQVVLW AWRSGLVHAP RPYAGEQLLG DLAADDDAVR
VAFSERTSGG LDVGLYTLPL PVADDGASGI RCDSPGALVL AELTLTRGTG AVTTGAVAFA
GGDGADLPIL VCIDAAKVSS AWATLDGAAL AVPGDFASGS AHLELRRIAR GGEGLLEAGV
EGKRGASLRV RVLAEPVPDG GQDPGAPPDD PGQGPGDGGP GGDDDGDDGS DEEPTPTVPG
DGDDDAPGGE DEQDGPTLPG RGGCASGGAD GLAIAGALAL LRLRRRTRA
|
|---|
| |