Gene Anae109_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1612 
Symbol 
ID5375726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1811836 
End bp1812558 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID640843121 
Producthypothetical protein 
Protein accessionYP_001378800 
Protein GI153004475 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00192145 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.534654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA TCTTCGAGAC GCGCAAGGCC ACGATGTTCG CCCGCTGGAA CCGGATGGCG 
AAGGTGTTCA CCCGGATCAG CAAGGACATC GCCATCGCGG TGAAGTCGGG CGGACCGAAC
CCGGACAACA ACCCGGCGCT CCGGCGCGCG CTGCAGAACG CCCGCGGCGC CAACATGCCC
AAGGACAAGG TCGAGGCCGC CATCAAGCGC GCCAGCGGCC AGGACCAGCA GGCGTACGAG
GTCGTCCTCT ACGAGGGTTA CGGGCCCCAC GGCATCGCGG TGATGGTCGA GACCGCCACC
GACAACGTGG TCCGGACCGT GGCGAACGTC CGGATGCACT TCAAGAACCA CGGCGGCAAC
CTCGGCACGT CGGGCAGCGT GGCGTTCCAG TTCCGCAAGA TGGGCGTCTT CCGGCTCGCG
CCCGAGGGGC TCGACCTCGA CACGATCGAG CTCGATCTCA TCGACCACGG CCTCGAGGAG
ATGGGCGAGG GGACCGGCGA GAAGGGGGAG AAGCAGCTCG TCATCCGCAG CGCGTTCGAG
AGCTTCGGGC AGCTGCAGGG GGCCATCGAG GAGCGGAAGC TCCCCCTCCT CTCGGCGGAG
CTGGAATTCG TGGCGCAGAC CCCCGTCGAG CTCCCCGAAG AGCAGGCGAA GGAGGTGCTC
GAGATGGTGG ACGCGCTGGA GCAGGACGAG GACGTCCAGC GAGTGTTCCA CAACCTGGCG
TAG
 
Protein sequence
MGRIFETRKA TMFARWNRMA KVFTRISKDI AIAVKSGGPN PDNNPALRRA LQNARGANMP 
KDKVEAAIKR ASGQDQQAYE VVLYEGYGPH GIAVMVETAT DNVVRTVANV RMHFKNHGGN
LGTSGSVAFQ FRKMGVFRLA PEGLDLDTIE LDLIDHGLEE MGEGTGEKGE KQLVIRSAFE
SFGQLQGAIE ERKLPLLSAE LEFVAQTPVE LPEEQAKEVL EMVDALEQDE DVQRVFHNLA