| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1588 |
|---|
| Symbol | |
|---|
| ID | 5376998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 1787571 |
|---|
| End bp | 1789805 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640843097 |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_001378776 |
|---|
| Protein GI | 153004451 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0301338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA AGAACTCCAC GATCATCTGG ACGGAAATTG ACGAAGCGCC CGCGCTGGCG
ACGTACTCGC TGCTTCCCAT CGTCCAGGCC TTCACGAAGG GGACGGGCGT CTCCGTGGAG
ACGAGGGACA TCTCCCTCGC CGGCCGGATC ATCGCGAACT TCCCGGAGAA CCTGACCGAG
AGCCAGCGGA TCCCGGACTA CCTCGCCCAG CTCGGCGAGC TCGCGCGGAC GCCCGAGGCC
AACATCGTCA AGCTGCCGAA CATCAGCGCC TCGATCCCCC AGCTCAAGGA GGCGATCAAG
GAGCTGCAGG GGAAGGGCTA CAAGATCCCG GACTACCCCG AGGCGCCGAA GGACGAGGCC
GAGAAGGCCA TCCAGACGCG TTACGCCAAG TGCCTGGGCA GCGCCGTCAA CCCGGTGCTG
CGCGAGGGCA ACTCGGACCG CCGCTCGCCC CTCTCCGTGA AGGCGTTCTC GAAGAAGAAC
CCGCACAAGC TCGGCGCCTG GACGCAGGAC TCGAAGTCCC ACGTCGCGCA CATGACGGAC
GGTGACTTCT ACGGCAGCGA GAACTCCACG ACGATCCAGA AGGCGACGGA CTACCGCATC
GAGTTCGTCT CCCCTGCGGG CGCCGTCACG GTCCTCAAGA AGAAGGCCGC GCTGAAGGAA
GGCGAGATCA TCGACACGTC GGTGATGAGC GCCCGCGCGC TGCGGAAGTT CTACGAGGAG
CAGATCGAGG ACGCGAAGAA GAACGACGTC CTGCTGTCGC TGCACCTCAA GGCCACCATG
ATGAAGGTCT CCGACCCCGT CATGTTCGGT CACGCCGTCA CCGTGTTCTA CAAGGACGTC
TTCGAGAAGC ACGCGGCGGC GCTCGCGGAG GCCGGCGTCA ACCCGAACCT GGGCCTCGGC
GACCTCTACA AGAAGATCCA GGCGCTGCCT GCGGACAAGA AGGCGGAGAT CGAGGCGGAC
ATCAAGGCCG TCTACGCGAA GCGCCCCGCG CTCGCGATGG TCGACTCGGA CAAGGGCATC
ACGAACCTGC ACGTCCCGAA CGACATCATC GTCGACGCGT CCATGCCCGT CGTCGTCCGC
GAGTCCGGCA AGATGTGGGG CCCGGACGGG AAGCTCAAGG ACACGAAGGC GATGATCCCG
GATCGCTGCT ACGCGACCAT GTACCGGGAG ATCATGGAGG ACTGCCGCAA GAACGGGGCG
CTCAACCCCG CGACGATGGG CAGCGTCCCG AACGTCGGCC TCATGGCGCA GCAGGCCGAG
GAGTACGGCT CGCACGACAA GACCTTCATC GCCTCGGCGA ACGGGACGAT CCGGGTCGTC
GACGACGGGA CGGGCGCGAC GCTGCTCGAG CAGAAGGTCG AGCAGGGCGA CATCTTCCGG
ATGTGCCAGG CGAAGGACGC GCCGATCCGC GACTGGGTGA AGCTCGCGGT CACCCGCGCC
CGCGCCACGG GCGCGCCGGC GGTGTTCTGG CTCGACAAGG CCCGCGCGCA CGACACGCAG
ATCATCGCGA AGGTCGAGAA GTACCTGAAG GATCACGACA CCGTCGGCCT CGAGATCAGC
ATCCTCCCGC CCGTCGAGGC GATGCGCCTC TCCCTGAAGC GGATCCGCGA GGGGAAGGAC
ACCATCTCGG TGACCGGCAA CGTGCTCCGT GACTACCTGA CCGACCTGTT CCCGATCCTC
GAGATCGGCA CCAGCGCGAA GATGCTGTCG GTCGTCCCGC TCCTCGCGGG CGGCGGGCTG
TTCGAGACGG GCGCCGGCGG CTCGGCGCCG AAGCACGTCC AGCAGTTCGT GAAGGAGGGC
TACCTGCGCT GGGACTCGCT CGGCGAGTTC TCCGCGCTCG GCGCCTCGCT CGAGCACATC
GCCAGCACCT CGGGGAACGC GAAGGCCGCC GTCCTCGGCG AGACCCTCGA CAAGGCCATC
GGCAAGTTCC TCGACAACAA CAAGTCCCCC GCGCGCAAGG TCGGCCAGAT CGACAACCGG
GGGAGCCACT TCTACCTCGC CCTGTACTGG GCCGAGGCGC TGGCCGAGCA GGCGAAGGAC
AAGGAGCTGC AGGCTCGCTT CGCCACGGTG GCGAAGCAGC TCGCGGAGAA CGCCGCGAAG
ATCGACGCGG AGCTGATCGC GGCGCAGGGG AAGCCGGTCG ACACCGGGGG CTACTACCGG
CCGGACCCGA AGAAGACGGC GGCGGCGATG CGTCCGAGCG CCACGCTGAA CGCGATCGTT
GATGCAATGG CGTAG
|
|---|
| Protein sequence | MTTKNSTIIW TEIDEAPALA TYSLLPIVQA FTKGTGVSVE TRDISLAGRI IANFPENLTE
SQRIPDYLAQ LGELARTPEA NIVKLPNISA SIPQLKEAIK ELQGKGYKIP DYPEAPKDEA
EKAIQTRYAK CLGSAVNPVL REGNSDRRSP LSVKAFSKKN PHKLGAWTQD SKSHVAHMTD
GDFYGSENST TIQKATDYRI EFVSPAGAVT VLKKKAALKE GEIIDTSVMS ARALRKFYEE
QIEDAKKNDV LLSLHLKATM MKVSDPVMFG HAVTVFYKDV FEKHAAALAE AGVNPNLGLG
DLYKKIQALP ADKKAEIEAD IKAVYAKRPA LAMVDSDKGI TNLHVPNDII VDASMPVVVR
ESGKMWGPDG KLKDTKAMIP DRCYATMYRE IMEDCRKNGA LNPATMGSVP NVGLMAQQAE
EYGSHDKTFI ASANGTIRVV DDGTGATLLE QKVEQGDIFR MCQAKDAPIR DWVKLAVTRA
RATGAPAVFW LDKARAHDTQ IIAKVEKYLK DHDTVGLEIS ILPPVEAMRL SLKRIREGKD
TISVTGNVLR DYLTDLFPIL EIGTSAKMLS VVPLLAGGGL FETGAGGSAP KHVQQFVKEG
YLRWDSLGEF SALGASLEHI ASTSGNAKAA VLGETLDKAI GKFLDNNKSP ARKVGQIDNR
GSHFYLALYW AEALAEQAKD KELQARFATV AKQLAENAAK IDAELIAAQG KPVDTGGYYR
PDPKKTAAAM RPSATLNAIV DAMA
|
|---|
| |