Gene Anae109_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1170 
Symbol 
ID5377754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1320616 
End bp1323537 
Gene Length2922 bp 
Protein Length973 aa 
Translation table11 
GC content70% 
IMG OID640842678 
Productexcinuclease ABC, A subunit 
Protein accessionYP_001378362 
Protein GI153004037 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.813756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC CCGATTCCAT CACCGTCAAG GGCGCGCGCG AGCACAACCT CAAGTCGGTC 
ACCCTCGAGA TCCCGAAGAA GAAGCTGGTG GTGTTCACCG GCGTCTCCGG GTCGGGGAAG
TCCTCGCTCG CGTTCGACAC CCTCTACGCC GAGGGGCAGC GCCGCTACGT CGAGTCCCTC
TCGTCCTACG CGCGCCAGTT CCTCGGGCAG ATGGAGAAGC CCAGGTACGA CACCATCCGC
GGGCTGTCGC CGACGATCTC CATCGAGCAG AAGGCGGCGT CGAACAACCC GCGCTCGACG
GTGGGGACCA TCACCGAGGT CCACGACTAC CTGCGCGTCC TGTACGCCTC GATCGGCCTC
CAGCACTGCC CCTCGTGCGG GCGGCCGGTC GGGAAGCAGA CGGCCCAGCA GATCGTCGAG
GCCATCCTCC AGTACCCGGA GGGCGCGCGC ATCCTCGTGC TCGCCCCCCT CGTGCAGAAC
CGCAAGGGTG AGTACAAGGA CCTCCTCGTC GACCTCGGCA AGCGCGGCTT CGCGCGCGTG
CGCGTGGACG GGATGATCCA CCAGCTCACC GAGCGGCTCG TCCTCGACAA GAAGCTGAAG
CACGACATCG AGCTCGTGGT CGATCGCCTC GTCGTGAAGG AGGGGATCCG CTCCCGGCTC
ACCGACTCCG TCGAGACGGC GCTGCGCGAG GGCAAGGGGA CGCTCGTCGT CGCCGACGCC
GACAAGGAGC AGAAGGTCGG CCCCGGCATC GATCCGGAGG AGTACAAGAC GCACGACCGC
TTCTTCTCCG AGCTGAACGC CTGCCACGCC TGCGGGCTCA GCTTCGGCGA GCTCGCGCCG
CAGAGCTTCT CCTTCAACTC CCCGCTCGGC TCCTGCCCCG ACTGCCAGGG GCTCGGGACG
CGCGCGGAGA TGGATCCGGA CCTCATCATC CCCGATCCGT CGCTCACCAT CCGCCAGGGC
GCGGTCGAGC CGTGGGCGAG CGGGATGGAG CGGGGCGAGG GCTGGACCTT CGAGTTCGTG
GAGCACCTCG CCCGCTCGCT CAAGATCGAC CTCGACCTGC CCTGGGCGAA GCTCCCGAAG
GCGCACCGCG ACGCGATCCT CCTCGGCACC GACGCGGTCG CGAACGGCGG GCGCTCCTGG
CGCATCGAGT TCGAGGGCGT CGTGAACCAG CTCTACCGCC GGCTGAAGGC GACGGGCTCC
GAGCAGATGC GGCGCTACTA CATGCGCTAC TTCTCGGACA AGCCCTGCCA CACGTGCGGC
GGCGAGCGGC TCAAGCCGGA GAGCCGCGCG GTGCGCATCC GCGGCAAGGG GATCGTGGAG
CTCTCCCGGC TCACCATCCA GGACGCCCAC GCCTGGCTGG GGTCGCTCGA TCTCAAGGGC
AGCGAGGCGA AGATCGCCGA CGAGCTCCTC AAGGAGATCA AGAACCGGCT CAAGTTCCTG
CTCGACGTCG GGCTCAGCTA CCTCACGCTC GATCGCCCCG GCCCGTCGCT CTCCGGCGGC
GAGAGCCAGC GCATCCGGCT CGCCTCGCAG ATGGGCTCGG AGCTCACCGG CGTCATCTAC
ATCCTCGACG AGCCGTCGAT CGGGCTCCAC CAGCGCGACA ACGGCAAGCT CCTCGCCACC
CTCAAGCGGC TCCGCGACGT CGGCAACTCG GTCATCGTCG TCGAGCACGA CGAGGAGACG
ATGGAGGAGG CCGACTGGCT CGTGGACTTC GGTCCGGGGG CCGGCGCGCA CGGCGGCGAG
ATCGTCAGCG CGGGGACGCC GGCCGAGGTG AAGCGCGATC CGGCGTCGCT CACCGGCGCC
TACCTCTCGG GGCGGAAGGA GATCTACGTC CCCGACCGGC GCCGCACCGA GGACAAGGGC
GCGATCACCA TCTCCGGCGC CACCGAGAAC AACCTCAAGG ACCTCACCGC GTCGTTCCCG
CTCGGCCGCT TCACGGCGGT GACCGGCGTC TCCGGGGCGG GCAAGTCCAC GCTCGTGAAC
GCGATCCTCC GCCCCGCGCT GATGCGCCAC CTCTACTCCA CGCGCGAGGT GCCCGGGAAG
CACCAGGCGC TCACCGGCTG GGAGAAGATC GACAAGGTCA TCGACATCAA CCAGCAGCCC
ATCGGCCGCA CGCCGCGGTC GAACCCCGCC ACCTACACCA AGGTCTTCGA CGCCATCCGC
GAGGTGTTCG CCCAGACGCC GGAGGCGCGC GCGTTCGGGT ACCAGCCCGG CCGCTTCAGC
TTCAACGTGA AGGGGGGCCG CTGCGAGGCG TGCCAGGGCG ACGGCATGAA GCTCGTCGAG
ATGCACTTCC TCGCCGACGT GCTCGTGCCC TGCGAGGTCT GCGGCGGCAA GCGCTTCAAC
GAGGCGACGC TGCGGGTGAC CTTCAAGGGC AAGAACATCG CCGAGGTGCT CGACCTCTCC
ATCGCCGAGG CGAAGGGGCT CTTCGAGCAC CACCGCGAGA TCGCGCGCAT CCTCACCACC
CTCGAGGACG TGGGCCTCGG CTACATCAAG CTCGGGCAGC CCTCCCCCAC CCTCTCCGGC
GGCGAGGCGC AGCGCATCAA GCTCTCGCGC GAGCTGGCCC GCGTCGGCAC CGGCAAGACG
CTCTACATCC TCGACGAGCC CACCACCGGC CTGCACTTCG AGGACGTGAA GAAGCTGCTC
GCCGTGCTCG ACCGGCTGGT GGACGCCGGC AACACGGTCG TCGTCATCGA GCACAACCTC
GACGTCATCA AGTGCGCCGA CTGGATCATC GACATCGGCC CGGAGGGCGG CGCGGACGGC
GGCCTCGTCA TCGCCGAGGG CACGCCCGAG GAGGTGGCGC GGGTGGAGGA GAGCTACACC
GGCCAGTTCC TCGCCAAGGT GCTCGAGAAC CACCGCCAGC GTGCGCGGCG CGCCGCCTCG
CCCCAGGGCG CGACCCGCGG GGCGCAGCGG GTGGGGGCGT AG
 
Protein sequence
MSEPDSITVK GAREHNLKSV TLEIPKKKLV VFTGVSGSGK SSLAFDTLYA EGQRRYVESL 
SSYARQFLGQ MEKPRYDTIR GLSPTISIEQ KAASNNPRST VGTITEVHDY LRVLYASIGL
QHCPSCGRPV GKQTAQQIVE AILQYPEGAR ILVLAPLVQN RKGEYKDLLV DLGKRGFARV
RVDGMIHQLT ERLVLDKKLK HDIELVVDRL VVKEGIRSRL TDSVETALRE GKGTLVVADA
DKEQKVGPGI DPEEYKTHDR FFSELNACHA CGLSFGELAP QSFSFNSPLG SCPDCQGLGT
RAEMDPDLII PDPSLTIRQG AVEPWASGME RGEGWTFEFV EHLARSLKID LDLPWAKLPK
AHRDAILLGT DAVANGGRSW RIEFEGVVNQ LYRRLKATGS EQMRRYYMRY FSDKPCHTCG
GERLKPESRA VRIRGKGIVE LSRLTIQDAH AWLGSLDLKG SEAKIADELL KEIKNRLKFL
LDVGLSYLTL DRPGPSLSGG ESQRIRLASQ MGSELTGVIY ILDEPSIGLH QRDNGKLLAT
LKRLRDVGNS VIVVEHDEET MEEADWLVDF GPGAGAHGGE IVSAGTPAEV KRDPASLTGA
YLSGRKEIYV PDRRRTEDKG AITISGATEN NLKDLTASFP LGRFTAVTGV SGAGKSTLVN
AILRPALMRH LYSTREVPGK HQALTGWEKI DKVIDINQQP IGRTPRSNPA TYTKVFDAIR
EVFAQTPEAR AFGYQPGRFS FNVKGGRCEA CQGDGMKLVE MHFLADVLVP CEVCGGKRFN
EATLRVTFKG KNIAEVLDLS IAEAKGLFEH HREIARILTT LEDVGLGYIK LGQPSPTLSG
GEAQRIKLSR ELARVGTGKT LYILDEPTTG LHFEDVKKLL AVLDRLVDAG NTVVVIEHNL
DVIKCADWII DIGPEGGADG GLVIAEGTPE EVARVEESYT GQFLAKVLEN HRQRARRAAS
PQGATRGAQR VGA