Gene Anae109_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1137 
Symbol 
ID5375205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1289289 
End bp1290047 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content76% 
IMG OID640842645 
Producthemolysin A 
Protein accessionYP_001378329 
Protein GI153004004 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00595243 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCATCGC GCAGGCAGCG CATCGACGTC GTGCTCGTCG CCCGCGGGCT CGCCGAGTCG 
CGCGCGAAGG CCCAGGCGCT GGTGATGGCG GGCGCCGTCG TCGTGGGCGA GGCGCGCGTC
GACAAGCCGG GCGCGCTCGT GGACGCCGAC GCGCCCGTCC GGCTGAAGGA GGGCGCCGCG
CCGCAGCGCT ACGTGTCGCG CGGCGCGCTC AAGCTGGAGA AGGCGCTCGA CGTCTTCCCC
GTCGATCCGG CCGGGAAGAT CTGCGCCGAT CTGGGGGCGT CCACCGGCGG GTTCACCGAC
GTGCTCCTGC AGCGCGGCGC CGCGCGCGTC TACGCCGTGG ACGTGGGGTA CGGGCAGCTG
CACCCGAAGC TGCGCGGTGA TCCCCGCGTC GTGGTGCGCG AGCGCGAGAA CGCCCGGGCG
CTGACGGCGG AGGCGCTCGG CACCCGGGTC GAGCTCGTCA CCGGCGATCT GTCCTTCATC
TCGCTCCGGC TCGTCCTCCC GGCCGTGCGA TCGATCCTCC GCCCGGGGGG CCACGCGGTG
CTGCTCGTGA AGCCGCAGTT CGAGGTGGGC AAGGGCGAGG TGGGCAAGGG GGGCGTCGTG
CGCGACGAGG CGAAGCGCCT GGCCGCGCTG GAGGGCATCG CGGCCGCGGC TCGCGAGCTC
GGGTTCGAGG TGCTCGGGCA CGCCGAGTCC CCCATCGAGG GCCCGGCCGG GAACCGGGAG
TGGCTGCTCG CGCTCCGGCT CCCGCCCGGC GAGGCGTGA
 
Protein sequence
MPSRRQRIDV VLVARGLAES RAKAQALVMA GAVVVGEARV DKPGALVDAD APVRLKEGAA 
PQRYVSRGAL KLEKALDVFP VDPAGKICAD LGASTGGFTD VLLQRGAARV YAVDVGYGQL
HPKLRGDPRV VVRERENARA LTAEALGTRV ELVTGDLSFI SLRLVLPAVR SILRPGGHAV
LLVKPQFEVG KGEVGKGGVV RDEAKRLAAL EGIAAAAREL GFEVLGHAES PIEGPAGNRE
WLLALRLPPG EA