| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0939 |
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| Symbol | |
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| ID | 5373860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | + |
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| Start bp | 1065326 |
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| End bp | 1067869 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640842446 |
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| Product | DNA ligase D |
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| Protein accession | YP_001378132 |
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| Protein GI | 153003807 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGACC GCCTCGAGCG ATATCGCGCC AAGCGCGACC CGGAACGGAC GCCGGAGCCG
TTCGGCCCGG CCGAGGCGGG GGCACGCGCG CTCGACGCCC CGCGCCTGTT CGTGGTCCAG
AAGCACGCCG CCCGCCGCCT CCACTGGGAC TTCCGGCTCG AGCTGGGCGG GACGCTGCGC
TCCTGGGCCG TCCCCAAGGG GCCCTCCGCC GACCCCTCCG ACAAGCGGAT GGCGGTGGAG
GTGGAGGACC ACCCCATCGA GTACGCGAAC TTCGAGGGGA TCATCCCCGC GGGGAACTAC
GGCGCCGGCG CGGTGATCGT CTGGGATCGC GGGACCTGGC GGCCGGTCGG CGATCCGTAC
GACGGGCTGG CGCGCGGCAA GCTCGTCTTC CAGCTCTCCG GCCACAAGCT GCACGGCGAG
TGGACGCTCG TCCGCACGCG CGCGGCGCAG GGCGGCAAGC AGCAGTGGCT GCTCCTGAAG
CACCGCGGCG ACGCGTGGGC CGGCCCGGGC CGGCCCTTCC CGGAGGAGTC GGTGCTCTCC
GGCCGGCTGC TCGAGGAGCT CGCCGCCGGC GAGGGACGCG CCGAGGCCGC GGTGCGCGCG
GCGGAGGGGC TCGGGGCCCC GCGGCGAGCG CTGGCGGACG CGGACGCCCG CCCCATGCTC
GCGGAGACGC GCGAGGGGCC GTTCGACGCG CCGGGGTGGC TGTTCGAGCT CAAGTACGAC
GGGTACCGGC TCGTCGCGCG TCGCGAGGGC TCGCGCGTCT CGCTGCGCTA CCGGAGCGGC
GAGGACGCGA CGGCGCTCTA CCCGGAGCTC GCGAAGGCGC TCGAGTCCTG GCCCCTCGAC
GCCGTCCTCG ACGGCGAGGT GGTCGTGCTC GGGCCCGACG GCCGCCCGTC CTTCCAGGCC
CTCCAGGGCC GCGCGCAGCT CGCGCGCCCG GCGGACGTGG CGCGCGCCGC GCTCGAGCGT
CCCGCCACCT ACTTCGTCTT CGATCTCCTC TCGCTCGCCG GCCTCGACCT CCGCGCGCTC
CCGCTGGTGG AGCGCAAGCG CCTCCTCGCG GAGGTCGCGC CGCGGCTCGG ACCCGTCCGC
CTCGCCGAGC ACGTCGAGGC GCGCGGCGAG GACCTCTACC GCGAGGTGCG CGCCCGCGGG
CTCGAGGGGA TCGTGGCGAA GCGGGCGGAC GCGCCCTACC GCGCCGGCCG CTCCGCCGCG
TGGCTCAAGA TCCGGGTCGA GCGCACGGGC GACTTCGCGA TCGTCGGCTT CACCGCGCCG
GCCGGCGCCC GCGCTCGCTT CGGCGCGCTG CACCTCGCCG TGCACGACGG CGAGGGGCTC
CTGTACGCGG GCAGCGTCGG GACGGGGTTC GGCGAGCGGC TGCTCGAGGA GCTCCACGCG
CGCCTCGCGC CGCGCGCACG AAAGACGCCT CCCTGCCGCG GGGCGGTCCC GCGCGGGCGC
GGGCACACCT GGGTCGAGCC GGAGCTCGTG TGCGAGGTGC GCTTCAGGGA GTGGACGGCG
GAGGGCCTCC TCCGGCAGCC GGTGTTCCTG AGGCTGCGCG AGGACAAGCG GCCGGAGGAG
GCCGTGCGCG AGGTCGCGCC GCACGAGGGC CCGCCGCCGG TGCCGCGCCC GGCGCGCGCC
GAGCGGCGCG TGGAGGTGAC GAACGGCGCC AAGGTGTGGT TCCCGGCGGA GGGCATCACC
AAGGCCGAGG TGGTGGACTA CTACCGCGCG ATCGCGCCCT TCATGCTGCC GTACCTGAGG
GACCGGCCCG TCGTGCTGAC GCGCTACCCC GACGGCATCG ACGGGAAGAG CTTCTTCCAG
AAGGACGCGC CGGAGTGGCG GCCCGAGTGG ATCCGCACGG TGCGCATCCG CAGCGAGGAG
GCGGAGCGCG ACCTCGACCA CTTCCTCGTC GACGACGCCG ACGGCCTCGC GTGGATCGCG
AACCTGGGGA CCATCCCCCT GCACGTGTGG GCGAGCCGCG CCGGCGCGCT CGAGCGGCCG
GACTGGTGCG TCGTGGATCT CGATCCGAAG GAGGCGCCGT TCGAGCACGT GGTGCGCATC
GCGCGGGCGC TGCACGCGCT GTGCGACGAC CTCGGGCTGC CCTCGTACCC GAAGACCACG
GGGCAGAAGG GCCTGCACGT GCTCGTCCCC CTCGGCGGCC AGCTCACCCA CGCGCAGTCC
CGGACGCTCG GCGAGCTCCT CGCCCGCGCG GTGGAGGGGG AGCTGCCGCG GCTCGCCACC
ACCGCGCGCG CTCTCTCCGC CCGCGGCGGC CGCGTCTACC TCGACTTCCT GCAGAACGGG
TACGGCAAGA CGATCGCCGC GCCGTACGCG GTCCGCCCCA GGCCGGGCGC GCCCGTCTCC
ACGCCGCTGC GCTGGAGCGA GGTGACGCCC AGGCTCGATC CCGCGCGCTT CACCATCCGG
AACGTCCCGG CGCGCGCGAG GCGGCTGCGC GCCGACCCGC TGCTGCCCGT CCTGTCGGAG
CGGCCCGACC TCGCCGCCGC GCTCGAGCGC CTGAGGGTGC GCATGGGCGA GGGGGAGCGC
GCCGCGGCGC GGCGGCGCTC GTAG
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| Protein sequence | MPDRLERYRA KRDPERTPEP FGPAEAGARA LDAPRLFVVQ KHAARRLHWD FRLELGGTLR
SWAVPKGPSA DPSDKRMAVE VEDHPIEYAN FEGIIPAGNY GAGAVIVWDR GTWRPVGDPY
DGLARGKLVF QLSGHKLHGE WTLVRTRAAQ GGKQQWLLLK HRGDAWAGPG RPFPEESVLS
GRLLEELAAG EGRAEAAVRA AEGLGAPRRA LADADARPML AETREGPFDA PGWLFELKYD
GYRLVARREG SRVSLRYRSG EDATALYPEL AKALESWPLD AVLDGEVVVL GPDGRPSFQA
LQGRAQLARP ADVARAALER PATYFVFDLL SLAGLDLRAL PLVERKRLLA EVAPRLGPVR
LAEHVEARGE DLYREVRARG LEGIVAKRAD APYRAGRSAA WLKIRVERTG DFAIVGFTAP
AGARARFGAL HLAVHDGEGL LYAGSVGTGF GERLLEELHA RLAPRARKTP PCRGAVPRGR
GHTWVEPELV CEVRFREWTA EGLLRQPVFL RLREDKRPEE AVREVAPHEG PPPVPRPARA
ERRVEVTNGA KVWFPAEGIT KAEVVDYYRA IAPFMLPYLR DRPVVLTRYP DGIDGKSFFQ
KDAPEWRPEW IRTVRIRSEE AERDLDHFLV DDADGLAWIA NLGTIPLHVW ASRAGALERP
DWCVVDLDPK EAPFEHVVRI ARALHALCDD LGLPSYPKTT GQKGLHVLVP LGGQLTHAQS
RTLGELLARA VEGELPRLAT TARALSARGG RVYLDFLQNG YGKTIAAPYA VRPRPGAPVS
TPLRWSEVTP RLDPARFTIR NVPARARRLR ADPLLPVLSE RPDLAAALER LRVRMGEGER
AAARRRS
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