Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_0832 |
Symbol | |
ID | 5376132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 941763 |
End bp | 943733 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640842341 |
Product | DNA ligase D |
Protein accession | YP_001378027 |
Protein GI | 153003702 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02778] DNA polymerase LigD, polymerase domain [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCACCC CGGCTCGGGG CCCGCATCTT CCGGATGTGA CCTCCCGACG AAGGCTCCCG CCCTACCGCC CGCAGCTCGC GCTCCTCGTC TCCGGGGCGC CCGAGGGTGC CGCGTGGGTG CACGAGGTGA AGTACGACGG GTACCGGATC GGCTGCGCGG TCGACGGCGG CGAGGTCACG CTCTGGAGCC GCCGCGGCAA GGACTGGACG GCGCAGTTCC CGGAGGTCGC CTCCTCGGCG CGGCGGCTGA AGGTCCGGTC GGCGCTCCTC GACGGCGAGG TGGCGGCCGT GCTGCCGGAC GGACGCACGA GCTTCCAGGC GCTGCAGAAC GCCTTCCACG GGGGACGCCG CGACCTCGTC TACTTCGCGT TCGACCTGCT CCACCTGGAC GGCGAGGACC TCACCTCCCG CCCGCTCCTC GAGCGGAAGG CCGCGCTCGC GGGGCTCCTG GGCGACGGCG GCGTCGTCCG GTACGCGCCG CACTTCGAGG GACGCGGGCC CGACGTCCAC CGCGAGGCGT GCAAGCTCGG GATGGAGGGC ATCGTCTCGA AGCGCTCCGA CCTGCCCTAC CGCGCGGGCC GCAACGCGAC CTGGGTGAAG ACGAAGTGCG TGCTGCGGCA GGAGCTCGTC ATCGGCGGCT TCACCGATCC CGAGGGCGCG GCGCGCGACG CCATCGGCGC GTTGCTCGTC GGCTACCGGG AGGGCGGCGC GCTCAGGTTC GCGGGCAAGG TCGGGACCGG CTTCACGAAC GCCAGCGCTC GCGCGCTCCG CGAGCGGCTC GCCGGCCTTC CGACCGACTC GAGCCCGTTC ACGCCGCGGC CGAGCGGCTG GCTCGGCCGC AACGCGCACT GGGTCCGGCC CGAGCTCGTG TGCGAGGTCG CCTTCACCGA GTGGACGGCG GACGGGAAGA TCCGCCACCC GTCGTTCCAG GGGCTCCGCG AGGACAAGCG CCCCGAGGAC GTCGTACGCG AGCGGGCGGC CGGGGGCGCG ACCTCGACCG CCACCTCGAC CGCGACCCCG ACGGAGAAGC GCGTGCCCCG GCGCTCGCGC TCGCCCGGGG CGGGCGAGGC CGAGGAGATC GGCGGCGTGC GCATCTCCAG CCCCGCCCGC GTGATGTACC CGGACCTCGG CGTCACGAAG CGGGACCTCG CCCGCTACTA CGAGGCGGTC GCGGACGCGA TGGTGCCGCA CCTCGCGGGG CGACCGCTCA CGCTGGTGCA TTGCCCGGAC GGGCTCGCCG GCGAGTGCCG CTACATGAAG CACTCGAAGC TCTGGGCACC GGACGCCGTG CGCCGCGTCC GCATCCCGGA GCGGACGAAG CTCGGAGAGT ACCTCGTCGT GGACGACGCC CGGGCGCTCC TCTCGATCGT CCAGATGGAC GTCCTCGAGC TGCACACCTG GAGCTCGACG GTCGACCGGC TGGAGGAGCC CGACCGGCTG GTGCTCGATC TCGACCCGGG GCCCGCGGTG GGCTGGGCGG AGGTGGTTCG CGCGGCGCGG CTGCTGCGCG ACGCGCTCGC CGCCCTGGGG CTCGGCGCCT TCGTCAAGAC CACGGGCGGC GCGGGGCTGC ACGTCGTCGC GCCGCTCGTG CCCGAGCGCC CGTGGAGCGA GTGCCTGGCG TTCGCGCGCG GGCTCGCCAC GACGCTCGCG CGGCACGACC CCTCCCGGTT CACGGTCGCC TACGCGAAGG CGGGCCGCGA GCGGAAGATC CTGCTCGACT ACCTGCGCAA CAACCGCACG AACACCTCCA TCGCGGCGTT CTCCACGCGC GCGCGCCCAG CCGCGACCGT GGCCGTGCCG CTCGCCTGGG ACGAGCTCTC CCCCCGCGCG CCGCCCGACC GCCACACGCT CCGGACCGTG CCGCGGCGGC TCGCGCGGCT CCGGGCCGAT CCCTGGGCGG GATACGACCG GGCGCGGCGC TCGCTCGCAC GCAGCCGGCT CGACGCGGTC GGGGCGTCGC CCGCGCCGTG A
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Protein sequence | MATPARGPHL PDVTSRRRLP PYRPQLALLV SGAPEGAAWV HEVKYDGYRI GCAVDGGEVT LWSRRGKDWT AQFPEVASSA RRLKVRSALL DGEVAAVLPD GRTSFQALQN AFHGGRRDLV YFAFDLLHLD GEDLTSRPLL ERKAALAGLL GDGGVVRYAP HFEGRGPDVH REACKLGMEG IVSKRSDLPY RAGRNATWVK TKCVLRQELV IGGFTDPEGA ARDAIGALLV GYREGGALRF AGKVGTGFTN ASARALRERL AGLPTDSSPF TPRPSGWLGR NAHWVRPELV CEVAFTEWTA DGKIRHPSFQ GLREDKRPED VVRERAAGGA TSTATSTATP TEKRVPRRSR SPGAGEAEEI GGVRISSPAR VMYPDLGVTK RDLARYYEAV ADAMVPHLAG RPLTLVHCPD GLAGECRYMK HSKLWAPDAV RRVRIPERTK LGEYLVVDDA RALLSIVQMD VLELHTWSST VDRLEEPDRL VLDLDPGPAV GWAEVVRAAR LLRDALAALG LGAFVKTTGG AGLHVVAPLV PERPWSECLA FARGLATTLA RHDPSRFTVA YAKAGRERKI LLDYLRNNRT NTSIAAFSTR ARPAATVAVP LAWDELSPRA PPDRHTLRTV PRRLARLRAD PWAGYDRARR SLARSRLDAV GASPAP
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