| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0768 |
|---|
| Symbol | |
|---|
| ID | 5375569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 869831 |
|---|
| End bp | 870388 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640842278 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001377964 |
|---|
| Protein GI | 153003639 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0336972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.920717 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGTG AAATCGTCAT CTGGCCAGAT CCGATCCTCA AGGAGGTCGC GAACCCCGTC
GAGCGGGTGG ACGACTCCAT CCGCCGGCTC CTCGACGACA TGGCCGAGAC CATGTACGCC
GCCGACGGCG TCGGGCTCGC CGCGCCGCAG ATCGCGGTCC TGAAGCGGGT GATCGTCATC
GACACCTCTC CCCGGCAGGA GGGGCAGAAG CTGATCCATC TCGTGAACCC GGAGATCGTC
CGCGCCGAGG GCGAGACGAC GTGGACCGAG GGCTGCCTGT CCATCCCCGG CGAGGCCGAG
GACGTCGCCC GCGCCGCGAA GGTGTGGGTC CGGGCGCTCG ACTACCACGG CAAGCCGTTC
GAGCTCGAGG CGGACGAGCT GCTCGCGATC GCGGTGCAGC ACGAGACCGA TCACCTGAAC
GGCACGCTCT TCGTGGACCA CCTCTCGAGC CTGAAGCGCG AGCTCATCCG CAAGCGGATG
AAGAAGCTCA AGACGCAGCG GGCCGAGGAG GCGGCGCGGG CGGTGCGCGA CGCGCCGAAG
CACGAGACCG CGCTCTAG
|
|---|
| Protein sequence | MVREIVIWPD PILKEVANPV ERVDDSIRRL LDDMAETMYA ADGVGLAAPQ IAVLKRVIVI
DTSPRQEGQK LIHLVNPEIV RAEGETTWTE GCLSIPGEAE DVARAAKVWV RALDYHGKPF
ELEADELLAI AVQHETDHLN GTLFVDHLSS LKRELIRKRM KKLKTQRAEE AARAVRDAPK
HETAL
|
|---|
| |