| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0762 |
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| Symbol | |
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| ID | 5377714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | + |
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| Start bp | 863123 |
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| End bp | 865582 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640842271 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD |
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| Protein accession | YP_001377958 |
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| Protein GI | 153003633 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.023937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.967295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA AGCTGCGGAG CATTCTAGGA AAGTTCGCCG GGCTCGCCCG TCCCAGACCC
GTTACAAAGG CGCCACATCG TGCAGAGCAG TCGAAGGAGC CGAGGCACAT GACCACGAAG
GCCGCGAAGA AGCCGCTCAA GAAGCCCGCC GCCAAGCCGA AGGCGAAGCC GGCGCCGCGG
GAGAAGGAGC GGCTCGCGAA GGCCGCGAAG GCGAAGGCCG CGCCGAAGCA CGCAGGGAAG
GTCGCCCGCT CGCCCGCCAA GGTGGAGAAG GCGGCGCACG CCCAGAAGCC GCAGAAGGCT
GCGCCCCGCA AGCCGGAGAA GGCCGAGAAG GTGGTCGAGA AGGCCGCGCG GGCGCCGGAG
AAGGCGGAGA AGGCGGAGAA GGTCTCGAAG AAGAAGGTCG AGGCCGTCGC GCCGGTCGCG
GTGGTGCCGC CGAAGGGGAA GGGGCCGAAG CTCCGCAAGG CGGCGAAGCC GTTCGACGGC
GAGGAGGCCG ACGCCGAGGA GGGCGAGGAG GTCGAGGCCG CCGCGGACGA CGACGAGCTC
GACGAGGACC TGCCCCAGGA CGACATGAGC GACATCACCG AGCGGTCCGA GGTGAAGGCG
CTCATGCAGC GGGGCCGCGA GAAGGGCTTC CTCACCTACG ACGAGGTGAA CGACGCCCTC
CCCTCAGACA TCGGCTCGGA CCAGATCGAC GACGTCATGT CGATGTTCGG CGAGCACGAC
ATCGAGGTGG TCGACGGCGC AGAGAAGAAG ATGAAGCTCC CGGACAAGCC GCCGGAGCCC
GAGGGCAAGG CGGAGGCCGA GGAGGAGAAG GACGAGGACG AGGACCCCGG CTACGGCAAG
TCCAACGACC CGGTCCGCAT GTACCTGCGG AAGATGGGGT CGGTGTCGCT CCTCACGCGC
GAGGGCGAGG TCGAGATCGC CAAGCGGATC GAGGAGGGCG AGAAGGAGAT CCTGGCGGCG
GTGCTCTCGT CGAGCATCGC GATCCGCGAG ATCCTCGAGC TCGGCGAGCG GCTGCGGAAG
GGCAAGATCC GGGTCCGCGA GATCATCAAG GACGCGGGCG ACGAGCAGCA GGCGGAGCGC
GAGGAGGAGG AGATCGAGGA GGAGTCGCTC GAGGCCGAGG GCGCCGAGGA GGCCTCCGCG
GAGGCCGCGG GCGCCGAGGG CCCCGAGGGT GGCGCGGCCG AGGGCGCCGA GCCCGAGCGC
CCGAAGATCC CCAAGGAGGA GGAGCGCAAG GTCGAGCACG TGCTGAAGCA CATCGACCTC
ATCCGCAAGC TCGAGGACGA CGTCGTGAAG GTGAAGGAGA CCCTCACGAC GAAGAAGGTC
TCGGAGCCGA AGCGCAAGGA GCTCAGGAGC GAGATCAAGA CCATCGAGGG CGAGATGATG
GAGCACCTCG AGGCCATCCA GCTCAACAAG AAGCAGATCG ACCGGATCGT CCTGCGCCTG
AAGGGCTTCA TCAAGCGGGT GGAGGAGGCG GAGCGCGAGC TCGCCGACTG CGAGCGGGCG
ACCTCCGTCC CGGTGCGCGA GCTGCGGCGG CTCCTGCGCG AGGCGCGCGA GGACGAGGGG
GCGCGCAAGA AGCTCGGGAA GAAGCTCGGG TGCTCGGCGG AGGAGGTCGA GGAGCTCGAC
CGGACGGTGC GCTCGGCGTA CCGCAAGATG CTGCGCGTCC AGGAGGAGGC GGAGGTCCCG
GTGGACGAGC TCCGCCGCAC CTACCGCACC ATCAGCGACG GCGAGCACAA GGCGGAGCGC
GCCAAGACCG AGCTCGTCGA GGCGAACCTG CGCCTCGTGG TGTCGATCGC GAAGAAGTAC
ACGAACCGCG GCCTGCAGTT CCTGGATCTC ATCCAGGAGG GCAACATCGG CCTCATGAAG
GCGGTGGACA AGTTCGAGTA CAAGCGCGGC TACAAGTTCT CGACCTACGC GACGTGGTGG
ATCCGCCAGG CGATCACGCG CGCCATCGCC GACCAGGCGC GCACGATCCG CATCCCGGTC
CACATGATCG AGACCATCAA CAAGCTCATC CGCACGAGCC GCTACCTCGT GCAGGAGCTC
GGCCGGGAGC CGACGCCGGA GGAGATCGCG GAGAAGATGG AGCTCCCGCT CGACAAGGTC
CGCAAGGTCC TCAAGATCGC CAAGGAGCCC ATCAGCCTCG AGACGCCCAT CGGCGAGGAG
GAGGACAGCC ACCTCGGTGA CTTCATCGAG GACAAGTCGC TCGTGTCGCC GTCCGACGCG
GTCATCAACA TGAACCTGGC CGAGCAGACG CGGAAGGTGC TCGCCACGCT CACGCCGCGC
GAGGAGAAGG TCCTCCGCAT GCGCTTCGGC ATCGGCGAGA AGAGCGACCA TACCCTCGAG
GAGGTCGGGC AGGACTTCGA GGTGACGCGC GAGCGCATCC GGCAGATCGA GGCGAAGGCG
CTCAGGAAGC TGCGCCATCC GAGCCGCTCG AAGCGGCTCA AGAGCTTCGT CGAGAATTAG
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| Protein sequence | MKRKLRSILG KFAGLARPRP VTKAPHRAEQ SKEPRHMTTK AAKKPLKKPA AKPKAKPAPR
EKERLAKAAK AKAAPKHAGK VARSPAKVEK AAHAQKPQKA APRKPEKAEK VVEKAARAPE
KAEKAEKVSK KKVEAVAPVA VVPPKGKGPK LRKAAKPFDG EEADAEEGEE VEAAADDDEL
DEDLPQDDMS DITERSEVKA LMQRGREKGF LTYDEVNDAL PSDIGSDQID DVMSMFGEHD
IEVVDGAEKK MKLPDKPPEP EGKAEAEEEK DEDEDPGYGK SNDPVRMYLR KMGSVSLLTR
EGEVEIAKRI EEGEKEILAA VLSSSIAIRE ILELGERLRK GKIRVREIIK DAGDEQQAER
EEEEIEEESL EAEGAEEASA EAAGAEGPEG GAAEGAEPER PKIPKEEERK VEHVLKHIDL
IRKLEDDVVK VKETLTTKKV SEPKRKELRS EIKTIEGEMM EHLEAIQLNK KQIDRIVLRL
KGFIKRVEEA ERELADCERA TSVPVRELRR LLREAREDEG ARKKLGKKLG CSAEEVEELD
RTVRSAYRKM LRVQEEAEVP VDELRRTYRT ISDGEHKAER AKTELVEANL RLVVSIAKKY
TNRGLQFLDL IQEGNIGLMK AVDKFEYKRG YKFSTYATWW IRQAITRAIA DQARTIRIPV
HMIETINKLI RTSRYLVQEL GREPTPEEIA EKMELPLDKV RKVLKIAKEP ISLETPIGEE
EDSHLGDFIE DKSLVSPSDA VINMNLAEQT RKVLATLTPR EEKVLRMRFG IGEKSDHTLE
EVGQDFEVTR ERIRQIEAKA LRKLRHPSRS KRLKSFVEN
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