Gene Anae109_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0729 
Symbol 
ID5376760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp825288 
End bp827099 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content70% 
IMG OID640842239 
Productgeneral secretory pathway protein E 
Protein accessionYP_001377926 
Protein GI153003601 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.26973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.525639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATGAGA TCCGCATGTC CGACCAAGCA CGCATCGAAG CCCACCGCCT GCCCCTCCCT 
CCGCCGCTCC CCGGCGCCGC CGGCGCGCGG CTCTGCGGCC GGCCGCTCGG GGAGATCCTG
GTCGCGACCG GCGCGCTCGC GCCCGAGCTC CTCGACGCGG CGCTGCTCGC GCAGCGGGGC
GAGCACGCCG GCGCGCGCCT CGGCGAGATC CTCGTCCGCA TGCGCGCGGT CTCGGAGGAG
GCGGTGCTGC GCGCGCTCGC GGCGCAGCTC GACCTCCCGT TCCTCGAGCG GATCGACCTC
GAGCGGATCC CGCCCGAGCT CGTGAAGAAG GTGCCGATCA ACTTCGCGAG GCAGGCGCGG
GTGCTGCCGG TGGGCCTCGA CGGCGACGCC GTTCGCGTGG CGGTGGTGGA CCCCCTCGAC
ACCGCGGCGC AGGACTCGCT GGCCATGCTG CTCGGCGCCG CGATCGCGCC GGAGGTGGCG
CCCGGCGCGG TGGTCGTCGA CGCGATCAAC GCCGTGTACG ACCGGGCGGC GGACGAGCAC
GAGCGGCTCA TGGAGGACCT CGAGACCGAG GACCTCGAGT CGGTCGCGCA CGAGCTCGAG
GAGCCCACGG ACCTCCTCGA CGCGGACGAC GAGGCGCCGA TCATCCGGCT CGTCAACTCG
CTCATGTTCC GGGCGGTGAA GGAGCGCGCG AGCGACATCC ACATCAACCC GGAGGAGAAG
GACATCTCGG TGCGCTACCG GATCGACGGC GTGCTGCGCG ACGTGATCCG CCCCCCGAAG
CGCTTCCAGG CCTCGATCTC CAGCCGCATC AAGATCATGG GCGGCCTCAA CATCGCCGAG
AAGCGGCTCC CGCAGGACGG GCGCATCCGG ATCAAGATCG CCGGCAAGGA CGTCGACATC
CGCCTCTCGA CCGTGCCCAC CGCGCACGGC GAGCGGATCG TGATGCGCCT CCTCGACAAG
TCGAACGTGG TGCTCGATCT CGGCCAGCTC GGCTTCGAGG ACTGGCAGCG CAAGATCATG
GACGGGCTCA TCACGCGCTC GCACGGGATC GTGCTCGTGA CGGGGCCCAC CGGCAGCGGC
AAGACCACCA CGCTCTACGG CGCGCTCGCG CAGATCAACT CGCCGGACCT GAACATCCTC
ACCATCGAGG ATCCGGTCGA GATCCCGCTG AAGGGGATCG GACAGGTGCA GGTGAACCCG
AAGATCGAGC TCACCTTCGC GAGCGGGCTC CGGTCGTTCC TGCGCCAGGA TCCGGACGTG
ATCATGGTCG GCGAGATCCG CGACCTCGAG ACCGCGGAGA TCGCGATCCA GGCCTCGCTC
ACCGGCCACC TCGTCCTCTC CACCGTCCAC ACGAACGACG CGGCGGGCGC GATCACCCGC
CTCGTGGACA TGGGCGTGCA GCCGTTCCTC GTGGCCTCGT CGCTCGTCGG CGTCCTCGCG
CAGCGGCTCG TCCGCGTCCT CTGCCCCGAG TGCCGCCAGC CGTACGTCCC GACGAAGGAG
GAGCGAGACC AGGTCGGGCT CACCGACGCC ATCTGGAAGA AAGCCGGGAG CCCGCAGGTC
GTCTACAAGG CCGGCGGCTG CCCGGCCTGC CAGAACACCG GCTTCCAGGG GCGCACCGGC
ATCTACGAGC TCATGCTCGT GGACGACGAC GTGCGCCAGC TGGTGCTGAA GAACGTCGAC
TCGACCGCCA TCAAGAAGGC GGCCGTGAAC CACGGGATGG TGACGCTGAT GGAGCACGGC
GCGTACAAGG TCGCGCGCGG GATCACCACC GCCGCCGAGG TGCTCTCCGT CACCGCAGAG
GACATTCACT AG
 
Protein sequence
MHEIRMSDQA RIEAHRLPLP PPLPGAAGAR LCGRPLGEIL VATGALAPEL LDAALLAQRG 
EHAGARLGEI LVRMRAVSEE AVLRALAAQL DLPFLERIDL ERIPPELVKK VPINFARQAR
VLPVGLDGDA VRVAVVDPLD TAAQDSLAML LGAAIAPEVA PGAVVVDAIN AVYDRAADEH
ERLMEDLETE DLESVAHELE EPTDLLDADD EAPIIRLVNS LMFRAVKERA SDIHINPEEK
DISVRYRIDG VLRDVIRPPK RFQASISSRI KIMGGLNIAE KRLPQDGRIR IKIAGKDVDI
RLSTVPTAHG ERIVMRLLDK SNVVLDLGQL GFEDWQRKIM DGLITRSHGI VLVTGPTGSG
KTTTLYGALA QINSPDLNIL TIEDPVEIPL KGIGQVQVNP KIELTFASGL RSFLRQDPDV
IMVGEIRDLE TAEIAIQASL TGHLVLSTVH TNDAAGAITR LVDMGVQPFL VASSLVGVLA
QRLVRVLCPE CRQPYVPTKE ERDQVGLTDA IWKKAGSPQV VYKAGGCPAC QNTGFQGRTG
IYELMLVDDD VRQLVLKNVD STAIKKAAVN HGMVTLMEHG AYKVARGITT AAEVLSVTAE
DIH