Gene Anae109_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0090 
Symbol 
ID5376182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp109810 
End bp110433 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content73% 
IMG OID640841604 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_001377294 
Protein GI153002969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID[TIGR00547] periplasmic chaperone LolA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.227988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.252414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG CCCTCGCCGC CCTCCTCCTC GCCGCCGCCC CGCCGCCCGC CGACGCGGGC 
CAGCTCGCTC GCAAGGTCCA GACCTTCTAC GAGCGCACCC GCGATCTGGA GGCCCGGTTC
CAGCAGACCT ACACCTACTC CGGCTTCGGG CGCCGCCAGG TCTCGGCGGG TACGCTCAAG
GTGAAGAAGC CCGGCATGAT GCGCTGGGAC TACGAGACGC CCGCGCCGAA GACCGTGGCG
GTGAAGGGGT CGCGCCTCGT GCAGTTCGAG CCCGAGGAGA ACCAGGCGTA CGTGGACGAG
CGCTTCGACG CGACCGCCAT GAGCGCGGCG GTCACGTTCC TCCTCGGCAA GGGCGACCTC
GCCCGCGAGT TCGGCCTCTC CACCGACGGG ACGGGGGCGC TGGTGCTCCG CCCGAAGGAG
GAGGACCCGC GGGTCGAGTC GATCGCGCTC ACCGTGGGGC CGGACGGCGA GGTGCGCGCC
ACGCGGGTCG TGGACGGGGC CGGCAACGTG AACGAGATCC GCTTCGAGAA GGTGAAGCGG
AACGCCGGGC TCCCCGACGG GGCCTTCGAG GTGAAGCTGC CCAAGGACGT GCGCCGCATC
GCGCCGCCCG GCGCGGAGCG GTAG
 
Protein sequence
MIAALAALLL AAAPPPADAG QLARKVQTFY ERTRDLEARF QQTYTYSGFG RRQVSAGTLK 
VKKPGMMRWD YETPAPKTVA VKGSRLVQFE PEENQAYVDE RFDATAMSAA VTFLLGKGDL
AREFGLSTDG TGALVLRPKE EDPRVESIAL TVGPDGEVRA TRVVDGAGNV NEIRFEKVKR
NAGLPDGAFE VKLPKDVRRI APPGAER