Gene Anae109_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0087 
Symbol 
ID5377800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp104672 
End bp108121 
Gene Length3450 bp 
Protein Length1149 aa 
Translation table11 
GC content72% 
IMG OID640841601 
Productmethionine synthase 
Protein accessionYP_001377291 
Protein GI153002966 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR00640] methylmalonyl-CoA mutase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.834345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.210518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTTCC GCGAAGCCAT CGACCGCCGC CCCCTCGTCT TCGACGGCGC GATGGGCACC 
CAGATCCAGC GCCACCAGCT CACGGCCGCG GAGTTCGGCG GCAAGGACGG GGCGAACGAT
CTCCTCACGC TGACCCGGCC CGACCTCGTG GAGGACATCC ACGCCCGCTA CTTCGCGGTG
GGCTGCGACG TCGTCGAGAC GAACACGTTC GGCTCCTCCC GCCTCAAGCT CGACGAGTAC
GGCCTCGGCC ACCGCACCTA CGAGGTGAAC TTCCGGGCCG CCATCCTCGC CCGCCGCGCC
GCCGAGCGGT TCGCCACCCC CGACCACCCG CGCTTCGTGG CCGGCTCCAT GGGGCCGACG
GGCATGCTGC CCTCGTCCTC GGACCCGGCC CTCGGGAACA TCACCTCCGA CGCGCTCGAG
CGGATCTTCT TCGAGCAGGC GAAGGGGCTC ATCGAGGGCG GCGTCGACGC CCTCATCATC
GAGACCCAGC AGGACATGCT GGAGCTGCGC GCCGCCGTGC TCGCCGCCGA CGCCTGCCGC
AAGGAGTTCC TGCGCGACGT CTTCATCATC GCCCAGCCCA CGCTCATCGA CGCGAACGGC
CGCATGCTGC TCGGCACGGA CGTGGCGAGC GCGCTCGCCA CCCTCGAGCG GCTGCCGGTG
GACGCGGTGG GCCTCAACTG CTCCACCGGC CCCGCCGAGA TGCGCGCGGC GGTGCGCACC
CTCGCGGAGA AGTCGAGCCA CTACGTCTCG GTGCTGCCGA ACGCGGGCAT GCCGGAGAAC
GAGGACGGAC GGGCGGTCTA CAAGCTCTCC CCGGCGGCCC TGGCCGACGC GCTCGCCGGG
TTCGTGGCCG AGTACGGCGT CGAGCTCGTG GGCGGCTGCT GCGGGACCAC CCCCGAGCAC
ATGCGCGCGG TGGTCGAGCG GGTGCGGGGG CTGCGCGCGC CGCGCCGCGC CCGGCCGGCC
CCGGCCCCAG AGCTCTCCAG CGCCATGAAG GCGGTCCCGC TCGCGATGGA GCCCCGGCCG
CTCATCGTGG GGGAGCGGCT CAACAGCCAG GGCTCGAAGA AGGTGAAGGA GCTCCTGCTC
GCCGACGACT ACGCCGGGCT CCTGCAGATC GCCCGCGGGC AGGTCGACGC CGGCGCGCAC
GTGCTCGACG TGTGCGTGGC GCTGAACGAG CGCGACGACG AGGGCGCGCA GATGCGCACG
CTCGCGAAGC TCCTCGCCCA GGCCGTGGAC GCCCCGCTCA TGATCGACTC GACCGAGGCG
GACGTGGTCG AGGGCGCGCT GAAGGTCTAC CCGGGCCGCT GCATCGTGAA CTCGGTGAAC
CTGGAGAAGT CCGGCGAAAG GGTGCGGAAG ATCCTCCCGC TCGTCCGGCG CTACGGCGCG
GCGGTGGTCG CCATGACCAT CGACGAGAAG GGGATGGCCC AGACCGCTGA GCGCAAGGCG
GAGATCGCGC GGCGCACCGT GGCCATCGCG AGGGACCACG GCATCCCGCC GGACAGCCTG
GTGTTCGACG CGCTCACGTT CACGCTCGCC ACCGGCGGCG AGGAGTACCG CAAGAGCGCC
ATCGAGACGC TCGAGGGGAT CCGCCGCATC AAGGCGGAGA ACCCGGGCGT CCTCACCACC
CTCGGCGTGT CGAACGTCTC CTTCGGCCTC GCGAAGAGCG CGCGCGAGGT GGTGAACTCG
GTCTTCCTCT ACCACGCGGT GCAGGCGGGG CTGGACCTCG CCATCGTGAA CCCCAAGGAC
ATCCGGCCCT ACCCGGCCAT CGCCGAGGAG GAGCGCGTCC TCGCCGAGGA CCTGCTCCTC
GACCGGCGCC CCGACGCGCT CGCGCGGCTC ATCGCGCACT TCGGGGCGAA GGGCGCCCCG
GAGAAGGCGG CGGTGGACCC GCTCGCCGCG GCGGGCGGCA AGAGCGCGGA GGAGCGGATC
CACCTGCAGA TCCTCCACCG GCGCCCGGAG GGGATCGAGG CGCTCATCGA CGACGCGCTC
ACCCGCCGCT CGGCGGTGGA GGTGCTGAAC CAGGTCCTCC TCCCCGCCAT GAAGGACGTG
GGGGATCGCT TCGGCGCGGG CGAGCTCATC CTCCCGTTCG TGCTGCAGTC CGCCGAGGTG
ATGAAGAAGG CCGTCGCCCA CCTCGAGCAG TTCCTCGAGA AGAAGGAGGG CGCCACGAAG
GGGACGGTCG TGCTCGCCAC CGTCTACGGG GACGTCCACG ACATCGGCAA GAACCTCGTG
AAGACGATCC TCGCGAACAA CGGCTTCACG GTCCACGACC TCGGCAAGCA GGTGCCGATC
GCGACCGTGA TCGAGAAGGC GGTGGCGGCC AACGCCGACG CCATCGGCCT GTCCGCCCTG
CTCGTCTCGA CCTCGAAGCA GATGCCCTTC TGCGTGGAGG AGCTCGCCCG GCGGAACCTG
TCCTTCCCCG TCATCATCGG CGGCGCCGCC ATCAACCGGC GCTTCGGCTA CCGCGCCCTC
TTCACGCAGG GCGGCGCCCC GTACCCGGGC GGCGTGTTCT ACGCGAAGGA CGCCTTCGAG
GGGCTCGAGG TGGTGGAGGC GCTCGTCGAC CCCGCCCGCC GGGAGGGCTT GAAGCAGGGC
GTGCTGCAGA AGGCGATCGC GAACCGCGAC ATGCCGGCCT CCCCGGTCCC GCCCCCGGCG
CCGGCGCGCC GCTCCGGCGT CGCCCCCGCG CTGCGCATCC CGTCCCCGCC GTTCTGGGGC
GCGCGGGTGG TCCCCGCGGG CGAGATCGCG CTCGCCGAGC TGTGGCCGCT GCTCGACCTC
CCCGAGCTCT TCAAGCTGCA GTGGGGCGTG AAGGCGAAGG GCGAGGAGTA CGAGCGGCTC
ATCCGCGAGC AGTTCGGCCC CAAGCTCGAG GAGCTGAAGG CCGAGGCGCA GGCGAACGGC
TGGCTCGTGC CGAAGGTGGT GTACGGCTAC TTCCCCTGCC ACGCCGAGGG GAACGATCTC
GTCGTGCTCG ACCCGACGCA CCGCAAGGCG GAGGTCGCGC GGCTCGTGCT CCCGCGCCAG
CCCGACGACC GGAACCTCTG CATGGCCGAC TGGTTCCGCG AGGAGCGCGG CTCGGACGTG
TGCGCGCTCC AGGTGGTGAC GGTGGGCGAT CAGGCGACGC ACCTCGCCGA GGCGGCGCAG
GAGCGCGGCG ACTACAGCCG GGGGCTCTTC GTGCACGGGC TCGCGGTGGA GGCGGCGGAG
GCGCTCGCGG AGTACTGGCA CCGGCGCGTC CGGGCGGAGC TCGGCGTCCC CGAGGGCCAG
GGCAAGCGCT ACTCGCCCGG CTATCCCTCC TGGCCGGAGC TCGCCGACCA GCGCCAGGTG
TGGAAGCTGC TCGAGCCCGA CCGGACCATC GGCGTCTCGC TCACCGAGGC GAACCAGATG
GTGCCGGAGG CGTCCACCTC GGCCATCGTG CTCCACCACC CGGACGCCAT CTACTTCGTC
GTGCGGGGCG CCACCGCTGC GGCGGTGTGA
 
Protein sequence
MTFREAIDRR PLVFDGAMGT QIQRHQLTAA EFGGKDGAND LLTLTRPDLV EDIHARYFAV 
GCDVVETNTF GSSRLKLDEY GLGHRTYEVN FRAAILARRA AERFATPDHP RFVAGSMGPT
GMLPSSSDPA LGNITSDALE RIFFEQAKGL IEGGVDALII ETQQDMLELR AAVLAADACR
KEFLRDVFII AQPTLIDANG RMLLGTDVAS ALATLERLPV DAVGLNCSTG PAEMRAAVRT
LAEKSSHYVS VLPNAGMPEN EDGRAVYKLS PAALADALAG FVAEYGVELV GGCCGTTPEH
MRAVVERVRG LRAPRRARPA PAPELSSAMK AVPLAMEPRP LIVGERLNSQ GSKKVKELLL
ADDYAGLLQI ARGQVDAGAH VLDVCVALNE RDDEGAQMRT LAKLLAQAVD APLMIDSTEA
DVVEGALKVY PGRCIVNSVN LEKSGERVRK ILPLVRRYGA AVVAMTIDEK GMAQTAERKA
EIARRTVAIA RDHGIPPDSL VFDALTFTLA TGGEEYRKSA IETLEGIRRI KAENPGVLTT
LGVSNVSFGL AKSAREVVNS VFLYHAVQAG LDLAIVNPKD IRPYPAIAEE ERVLAEDLLL
DRRPDALARL IAHFGAKGAP EKAAVDPLAA AGGKSAEERI HLQILHRRPE GIEALIDDAL
TRRSAVEVLN QVLLPAMKDV GDRFGAGELI LPFVLQSAEV MKKAVAHLEQ FLEKKEGATK
GTVVLATVYG DVHDIGKNLV KTILANNGFT VHDLGKQVPI ATVIEKAVAA NADAIGLSAL
LVSTSKQMPF CVEELARRNL SFPVIIGGAA INRRFGYRAL FTQGGAPYPG GVFYAKDAFE
GLEVVEALVD PARREGLKQG VLQKAIANRD MPASPVPPPA PARRSGVAPA LRIPSPPFWG
ARVVPAGEIA LAELWPLLDL PELFKLQWGV KAKGEEYERL IREQFGPKLE ELKAEAQANG
WLVPKVVYGY FPCHAEGNDL VVLDPTHRKA EVARLVLPRQ PDDRNLCMAD WFREERGSDV
CALQVVTVGD QATHLAEAAQ ERGDYSRGLF VHGLAVEAAE ALAEYWHRRV RAELGVPEGQ
GKRYSPGYPS WPELADQRQV WKLLEPDRTI GVSLTEANQM VPEASTSAIV LHHPDAIYFV
VRGATAAAV