Gene Anae109_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0086 
Symbol 
ID5377799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp102967 
End bp104379 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content75% 
IMG OID640841600 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001377290 
Protein GI153002965 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.300814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGT CCCTGCCCTA TCTCGGCCTC GGCAGCGCTG AGTCGCTGCA GCAGGTCGCG 
GACGCATTCC CCGACGGCGT CTTCACGACC GACCGGGACG GCGTGATCAC CTACTGGAAC
CCCGCCGCCG GGGCGATCAC CGGCTACTCC GCCGCGGAGG CGATCGGCCG CACCTGCGCG
CTCCTCGCCG GGGACATGGG GCGCGGCTGC ATGTGCGGAG GCGGGCCGGT GCGCTGCGGG
ATCTCCGACC GCGGGAAGAG CTCCAAGTGC TGCAGCATCC GCACGAAGGA CGGCCGGGAG
CGGCTCATCG TGAAGAACGC GGTGGCCTTC CACGGGCCGG ACGGGACCGT CGCCGGCGCG
CTCGAGAGCT TCACCGACGT CACGGACCTG AGCGTCGGCG CCATCCCGTG GGAGAGCGCG
TGCGCGCTCC CGGCTCCGTC CGCCGGCGTC GCCGCCGCGG CGGAGGCCGC GCCGCCGGAG
AGCGAGTGCG CAGGGCTCCT CGGCTGCCAC CCGGTCATGC GCGAGCTGTA CCGGATGATC
GCCCTCGTCG CCCGCTCCGA CGCGACGGTC ATGATCCTGG GCGAGAGCGG CGTGGGAAAG
GAGCGCGTGG CCGAGGCGAT CCACCGGCAG AGCCGGCGCG CGGCGGGGCC GCTCGTGCGG
GTGTCGTGCT CCGCCCTCAA CGAGAACCTC CTCGAGAGCG AGCTCTTCGG CCACGTGAAG
GGGGCGTTCA CCGGGGCGCT GCGCGACCGG CGCGGCCGGT TCCAGGAGGC GCACGGCGGG
ACCCTCCTGC TCGACGAGAT CGGCGACATC TCACCGGCGG TCCAGGTGAA GCTCCTGCGC
GTCATCGAGC AGCGCGTGGT CGAGCGGGTG GGCGACTCGC AACCGCTCCC GGTCGACGTG
CGGCTCCTCT GCGCCACGCA CCGGGACCTG AAGCAGCTCG TGACCGACGG CCGCTTCCGC
GCCGACCTGT ACTTCCGCCT GGCGGTGTTC CCGCTCCGCG TGCCGCCGCT GCGCGAGCGC
GCCGAGGACG TGGCGCTCCT CTCGGAGGGC TTCCTCGCGC GGCTCGGCGC GCCGCCGCCC
TCGCCGGAAG CGTCGCGGCT CCTCGCCGCC TACGCGTGGC CGGGGAACGT GCGCGAGCTG
CAGAACGTGC TCGAGTACGC GGCGCTGCAG GCGGGCGGCG CGCCCATCTC GCCCGCCCAC
CTCCCCGCCG AGATCCGCGG CGCCGCGCCG CCCACGCCGG AGCGCGCCGC GCCCGATCGC
TCGGCGATCG TCGAGGCGCT CATCCGGACC GGCTGGAACC GCGCGCGCGC CGCCGACGTG
CTCGGCATCT CGCGCGTGAC GCTGTGGAAG CGGATGAAGC GGCTCGGCGT GGTGGGCCCC
GGCCCGATGG CGTCCGGGCG GGAGCCGCTC TGA
 
Protein sequence
MIPSLPYLGL GSAESLQQVA DAFPDGVFTT DRDGVITYWN PAAGAITGYS AAEAIGRTCA 
LLAGDMGRGC MCGGGPVRCG ISDRGKSSKC CSIRTKDGRE RLIVKNAVAF HGPDGTVAGA
LESFTDVTDL SVGAIPWESA CALPAPSAGV AAAAEAAPPE SECAGLLGCH PVMRELYRMI
ALVARSDATV MILGESGVGK ERVAEAIHRQ SRRAAGPLVR VSCSALNENL LESELFGHVK
GAFTGALRDR RGRFQEAHGG TLLLDEIGDI SPAVQVKLLR VIEQRVVERV GDSQPLPVDV
RLLCATHRDL KQLVTDGRFR ADLYFRLAVF PLRVPPLRER AEDVALLSEG FLARLGAPPP
SPEASRLLAA YAWPGNVREL QNVLEYAALQ AGGAPISPAH LPAEIRGAAP PTPERAAPDR
SAIVEALIRT GWNRARAADV LGISRVTLWK RMKRLGVVGP GPMASGREPL