Gene Anae109_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0002 
Symbol 
ID5374904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1847 
End bp2977 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID640841514 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_001377206 
Protein GI153002881 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA AGATCGGCGT GGCGGAGCTG GCCAAGGCGC TCGGGCGCTC CCAGGGCATC 
GTGGAAAAGA AGAGCACGAT GCCGATCCTC TCCCACGTGC TCCTCGAGGC GAAGGGCGGC
CACCTCGTGG TCTCCGCCAC CGACCTCGAC CTCGCGGTCT CCTCGGAGCA CGGGGAGCAC
TGCGAGGTCC TGAAGGAGGG GGCCCTCGCC GTCTCCGCAC GCCACCTGTA CGAGATCGTG
CGGGCCCTGC CCGAGCAGCA GGTGACGCTC AAGCGCGCGC ACAACAACTA CCTGGAGGTC
CGGAGCGGCC CCTCGGAGTT CCGCATCGTC GGCCTGCCCG CCGAGGACTT CCCCGCGCTG
CCGCGCTTCG AGAAGGTGAC CTTCTCGGAC GTGAAGCCGG AGGACCTGCT CGACATGATC
GAGCGGACCT TCTTCGCCGT CTCGAACGAC GAGACCCGCT ACAACCTGAA CGGCGTCTAC
TTCGAGCCCG GGCCCGAGGT GCTGCGCCTC GTCGCCACCG ACGGCCACCG CCTGTCGCTC
TCGGAGCGCT CGATCGGCGG GACCTTCGGC CTGAAGCGCG GCGTGATCCT CCCGAAGAAG
GGCCTGCACG AGCTGCGCAA GCTCCTCGGC GAGGCGGTGG AGGCCGGCGC GGACGCCGGC
GAGACCAAGC TCGGCTTCGT CGAGAACAGC GCCATCTTCC GCCGTCCGGG CGTGATCCTC
TCCATGCGGC TCATCGAGGG GCTCTTCCCG GACTACCGCC AGGTCATCCC GAAGCAGGGC
GAGAAGGTGC TCCGCCTCGG GCGCGATCGC TTCCTCGAGA CGCTGCGCCG CGTCTCCCTC
CTCTCCAGCG ACAAGGCGCA CGCGGTGAAG CTCGAGCTCG GCCAGGGCAC GCTCAAGGTG
CTCTCGCAGA ACCCCGACCT CGGCGAGGCG AAGGAGGAGG TGCCGGTCGA GTACGCCGGC
GAGCCGCTCA AGATCGGCTT CAACGCCCGC TACCTCATGG ACGTGCTCGG GGTGGTGAAG
AGCGCCGAGG TGCAGCTCGA GCTCGCGGAC GACCTCTCCC CCGGCGTCAT GCGCGGGGGC
GACGAGAAGG ACGCCGGCTT CACCGCGGTG GTGATGCCGA TGCGGATCTG A
 
Protein sequence
MELKIGVAEL AKALGRSQGI VEKKSTMPIL SHVLLEAKGG HLVVSATDLD LAVSSEHGEH 
CEVLKEGALA VSARHLYEIV RALPEQQVTL KRAHNNYLEV RSGPSEFRIV GLPAEDFPAL
PRFEKVTFSD VKPEDLLDMI ERTFFAVSND ETRYNLNGVY FEPGPEVLRL VATDGHRLSL
SERSIGGTFG LKRGVILPKK GLHELRKLLG EAVEAGADAG ETKLGFVENS AIFRRPGVIL
SMRLIEGLFP DYRQVIPKQG EKVLRLGRDR FLETLRRVSL LSSDKAHAVK LELGQGTLKV
LSQNPDLGEA KEEVPVEYAG EPLKIGFNAR YLMDVLGVVK SAEVQLELAD DLSPGVMRGG
DEKDAGFTAV VMPMRI