Gene Bcer98_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3885 
Symbol 
ID5345587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3944262 
End bp3945407 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID640841370 
Productmajor facilitator transporter 
Protein accessionYP_001377066 
Protein GI152977549 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAT TCATTACAGT ATTGGCTACA TTCTTGGCTT TCTCAGGTAT TGGGGTTGTC 
GACCCTATTT TGCCAATTAT AGCTGAGAAA ATTGGTGCCA CACATTGGCA AGTAGAAATG
CTGTTTACAG CGTATATTTT AACGATGGCA ATTATGATGT TACCAGCAGG AATCTTTGCT
TCCAGATTTG GAGATAAGCG AATGATGACA ATTGGTCTTG CGATTGTAAC TGTTTTTGCA
TTTACATGTG CTATATCACA AACAATTGCG CAATTATCTC TTTTCCGTGC AGGATGGGGA
CTAGGGAACG CGATGTTTTT TGCAACAGCA ATGACATTAT TGATTGCTCT AAGTCAAGAA
GTTCATGAGG CAGTCGGTTT ATATGAGGCA GCAATTGGTT TCGGTATGGC TGGCGGACCG
TTATTAGGTG GTATATTAGG CGGATATTCA TGGCGTTACC CATTTTTTGC AACGAGCTTT
TTCATTTTCT TAGCATTTAT TTTAGTATTC TTTTTTGTAA AAGAGCCGGA GCGAAAAACG
AAGCGTAAGG CAGCTGGTGT AGGAGAATTA CTTAACTTAG TAAAATATAA ACCATTTATG
CAAGGTGCGA TTTCAGGTAT GTTATATTAC TATGGTTTCT TCGTTGTGCT AGCGTATTCA
CCACTTATTA TGCATGTATC AGCAATCCAA CTTGGATTTG TATTTTGCGG ATGGGGGTTA
GCATTAGCAT ATGGTTCTGC GATATTAGCT CATAAATTAG AAGGGAAATA TGAACCGAAG
GCATTGCTAC GTTTCAGCTT ATTTGTATTT GCCATCCTAT TAGTTGCATT ATTCTTTGTT
CAAATCATGT GGTTACAAAT TGTTTTCATT GTTTTATCTG GATTAGCATC TGGCTTAAAT
AACGCTCTAT ACACAAGCTA TGTGATGGAT ATTTCACCTT ATGAAAGATC GATTACATCG
GGTGTGTATA ACTTTGTGCG CTGGTTAGGC GGAGCAATTG CTCCTATTTT ATCGGGAATT
ATTGGTCATG CAATTTCACC ACAGAGTCCG TTTTTAGTAG GTGGAATCGT TGTTTTAGTT
GGATGTGTTA TGATTTTTAT TCCAGTTCGT CAATCAGCAG AAATAGAGAC AAAGGCCCTT
TCTTAA
 
Protein sequence
MGRFITVLAT FLAFSGIGVV DPILPIIAEK IGATHWQVEM LFTAYILTMA IMMLPAGIFA 
SRFGDKRMMT IGLAIVTVFA FTCAISQTIA QLSLFRAGWG LGNAMFFATA MTLLIALSQE
VHEAVGLYEA AIGFGMAGGP LLGGILGGYS WRYPFFATSF FIFLAFILVF FFVKEPERKT
KRKAAGVGEL LNLVKYKPFM QGAISGMLYY YGFFVVLAYS PLIMHVSAIQ LGFVFCGWGL
ALAYGSAILA HKLEGKYEPK ALLRFSLFVF AILLVALFFV QIMWLQIVFI VLSGLASGLN
NALYTSYVMD ISPYERSITS GVYNFVRWLG GAIAPILSGI IGHAISPQSP FLVGGIVVLV
GCVMIFIPVR QSAEIETKAL S