| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_3884 |
|---|
| Symbol | |
|---|
| ID | 5346826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 3943270 |
|---|
| End bp | 3944097 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640841369 |
|---|
| Product | spermidine synthase |
|---|
| Protein accession | YP_001377065 |
|---|
| Protein GI | 152977548 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | [TIGR00417] spermidine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTAT GGTTCACTGA GAAACAAACA AAACATTTTG GAATTACGGC GCGTATTAAC
CGCACATTAC ATACGGAGCA AACAGAATTT CAAAAGCTTG ATATGGTAGA AACAGAAGAG
TTCGGAAACA TGCTGATTTT AGATGGTATG GTAATGACAA CAGAAAAAGA TGAGTTTGTC
TATCATGAAA TGGTAGCGCA TGTTCCTTTA TTTACACATC CAAACCCTGA GAACGTATTA
GTTGTTGGTG GTGGCGATGG TGGTGTCATT CGCGAAGTAC TAAAACACCC AAGCGTGAAG
AAAGCAACAC TTGTTGAAAT CGATGGGAAA GTAATTGAGT ATTCTAAGAA ATATTTGCCA
TCTATTGCAG GAGCATTAGA TCATGAACGT GTGGAAGTAA AAGTAGGAGA TGGTTTCCTA
CATATCGCAG AAAGTGAAAA TGAATACGAT GTAATTATGG TTGACTCTAC AGAGCCAGTC
GGACCAGCAG TTAACTTATT TACAAAAGGA TTCTACGCTG GAATCTCTAA AGCGTTAAAA
GAAGATGGGA TTTTCGTTGC ACAAACGGAC AACCCTTGGT TTACACCAGA ATTAATTACA
AATGTAGTGA AAGATGTGAA AGAAATTTTC CCAATTACTC GTTTGTATAC AGCAAACATT
CCAACGTACC CAAGTGGACT TTGGACATTT ACAATTGGAT CTAAAAAGTA TGATCCACTA
GAAGTAAGTG AAGACCGTTT CCATGATATC GAAACGAAGT ATTATACAAA AGAACTTCAT
AAAGCATCAT TTGCTTTACC GAAGTTTGTT GGAGATTTAA TTAAGTAA
|
|---|
| Protein sequence | MELWFTEKQT KHFGITARIN RTLHTEQTEF QKLDMVETEE FGNMLILDGM VMTTEKDEFV
YHEMVAHVPL FTHPNPENVL VVGGGDGGVI REVLKHPSVK KATLVEIDGK VIEYSKKYLP
SIAGALDHER VEVKVGDGFL HIAESENEYD VIMVDSTEPV GPAVNLFTKG FYAGISKALK
EDGIFVAQTD NPWFTPELIT NVVKDVKEIF PITRLYTANI PTYPSGLWTF TIGSKKYDPL
EVSEDRFHDI ETKYYTKELH KASFALPKFV GDLIK
|
|---|
| |