| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_3748 |
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| Symbol | |
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| ID | 5347149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | + |
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| Start bp | 3803797 |
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| End bp | 3806490 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640841239 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001376935 |
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| Protein GI | 152977418 |
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| COG category | [K] Transcription |
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| COG ID | [COG3933] Transcriptional antiterminator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00968283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA TTGACCTCAT CTATGATGCA ATACAGAAGG GGCATTACAC AGAGGGTGTA
ACAGCATCTG ATTTGGCTAC ACTTTTACAG CTAGACCGTG CAAATGTGAG CAGCGATTTA
AATAAACTCG TGAAAGATGG ACGATTATGT AAAACAAATA CAAGACCTGT TCGTTTCTAT
ATAGAGTTAA ATCATCTATT GGAAACGCCT TCAACGGGTA GCACCGCACT TGACAATTTC
GCAAAAGAAA ACACAAGTCT TAAAATTGCA ATTGAAAAAG CAAAAGCTGC CGTACTCTAT
CCGCCAAATG GTATGCATAC ATTACTACTT GGAGAAACAG GTGTTGGAAA ATCTATGTTT
GCCTCCTTAA TGCACGAATA CGCAATTGAA GTCAATCAAC TGCAAAAAGA CGCACCCTTT
ATTATTTTTA ACTGTGCTGA CTATGCGAAT AATCCACAGC TTTTACTTGG ACAACTCTTC
GGAATCAAAA AGGGTGCTTA CACTGGTGCA AATGAGCAAA AAGGATTAAT TGAAAAGGCC
CATGAAGGCA TTTTATTTTT AGATGAAGTA CATCGTCTTC CGCCAGAAGG ACAAGAAATG
CTCTTCACGT TTATCGATCG TGGTGTCTAT CGTCGCCTTG GCGAAACAGA AAATGAACGT
AAGGCAAAAG TATTAATTAT TGCAGCAACA ACAGAAGAAC CAAATTCATT TTTATTAAAA
ACATTTACAA GACGAATTCC AATGACTATC ACATTGCCAC CGCTTCGCGA ACGAACATAT
GAAGAACGCT TTACACTTTT ACAGCTTTTT TTTACAAATG AAGCCATTCG TCTCAGAAAA
AACATACATG TTAGTCCAAA TGCAATGCGC GCTCTCGTCT TTTATCAATG TCCAAATAAT
ATCGGACAAT TGAAAGCAGA CGTCCAAATC GCATGTGCAA AAGCCTATTC TGATTTTGTA
ACAAAAAAAC GAGAATCTGT CCGCGTCTCG AGTACCGATT TGCCATGGTA TATAAAAGAA
GGGCTCTTTA TTGAAAGAAA AAGCCGTCAC TTATACCAAG TGCCAAATGA AACGTTTTTA
TTTACAAGTG ATAAAGGGTG GAGCAAGCAC GAACTAGACA ATCAACGTAC ATCTATTTAT
GAGTACATCG ATCATAAATA TGAAGAACTT CAAGCTCAAG GTATTGAAGA AGCTGAACTA
GAGCTGCTCA TTGAAAATGA TATTCAAAGC TTCTTCGTTC AATATTTTCA TCAAATGTCT
AAAACAACCA ATCATGAAAA TGTATTTAAA ATTGTGGACC ATTGCATTGT TTCTGTATGT
GAAAAAATTG CCTCACTAGT AGAAAAACAC TTATCTAAGA CTTTTGATGA AAAGGTATTT
CTTGCTTTAA ATTTGCATGT ACAGACAACT TTACAACGGA TACGAAGTGG GAAACAAATC
CATCACCCAC AGCTAAACCA AATTCGAACA AAATATAAAG AAGCTTTCTC TGTAGCAATG
AAGTGCCTTC AAGTTTTAGA AGACGAATTA CAAATCACGA TGCCAATTGA CGAAGCTGGA
TTTTTAACAA TGTTTTTCGT TGTTGATCCA CTTCCTGCCT CACAAGCAGA AGTAAAAGTC
TTAATTTTAG CTCACGGAAA TGGTATTGCA ACTGAAATGG CTAATGTCGC CAATGAACTT
CTTGGTATGC ATGAAGTAAC TGGCATCGAT ATGCCGCTAC ACGAATCGCC AAAAAGCTTT
TTAGAGCGCG TGAAAGTCTA TATGCGAACA CTTGAACATA TAAACGGACT TCTCTTACTT
GTAGATATGG GATCGCTCGC TTATATAGGG GATATATTAG AAACTGAATT TCAAATTCCA
GTTCGCGTCC TTTCTATGAC GAGTACACCG CATGTATTAG AAGCCGCTCG AAAGGCCCAG
CTCGGCTATT CATTGGATGC TTTATATGAA ACCGTAAAAA ATTTAACACC TTTTTATTTA
CACGTACACG AAGAAAAGAA AAAACCACTA TCTCCAATGA AATCCGTTAT TTTAACGGCC
TGCCTAACTG GCGAAGGAAG CGCGCTTGCT ATTCAAAAGA TGCTTGAAAA TTATTTGCGC
TTTGATAAAA ATTTAATTGA AATTATCCCC ATTAGCATCG TTCATCAAAA AGATTTAACA
AAGATGCTTG AGAATATAAA AAAGGAACGA AATATCATTT GTATTGTGAC CAATTTCGAT
GTGCAAGTAC CATGCTTAAC TTACCATTTC CAAGATATCG TAAACTATAA AGCCATTCAG
CCAATTCAAG AACTTATTAC GTATGAAGAA ACATACGCTA AAATGGCTGA TATTCTCGGA
CAACAAATGC AGCGAGATGA CGGAGCACTC ATGATTAAGA CGATTCGTTA TACATTAAAT
ACAATTCAAG AGCTCACCTC CTTACAGCTA AATCCCGATA GCCTAATGGG CGTCATCCTA
CATATGAGCT GTATGATTGA CCGTCTTCAA AAAGGAGAGA GTCTCCTTCC TTATCCAGAT
CGAGAAACTC GTCGCCAAGA TCAATACTGG ATGTACATGA AAGTAAAAAA AGCGCTGCAA
CCAATTGAAA ATACATTTAC AGTAAACATT CCAGATGATG AAGTATTTTA TGTGATGGAC
TTCTTCATCA AGAATCAACC GCAAAAAGAT CATGAAACAA ACGAAAGCCC GTGA
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| Protein sequence | MKRIDLIYDA IQKGHYTEGV TASDLATLLQ LDRANVSSDL NKLVKDGRLC KTNTRPVRFY
IELNHLLETP STGSTALDNF AKENTSLKIA IEKAKAAVLY PPNGMHTLLL GETGVGKSMF
ASLMHEYAIE VNQLQKDAPF IIFNCADYAN NPQLLLGQLF GIKKGAYTGA NEQKGLIEKA
HEGILFLDEV HRLPPEGQEM LFTFIDRGVY RRLGETENER KAKVLIIAAT TEEPNSFLLK
TFTRRIPMTI TLPPLRERTY EERFTLLQLF FTNEAIRLRK NIHVSPNAMR ALVFYQCPNN
IGQLKADVQI ACAKAYSDFV TKKRESVRVS STDLPWYIKE GLFIERKSRH LYQVPNETFL
FTSDKGWSKH ELDNQRTSIY EYIDHKYEEL QAQGIEEAEL ELLIENDIQS FFVQYFHQMS
KTTNHENVFK IVDHCIVSVC EKIASLVEKH LSKTFDEKVF LALNLHVQTT LQRIRSGKQI
HHPQLNQIRT KYKEAFSVAM KCLQVLEDEL QITMPIDEAG FLTMFFVVDP LPASQAEVKV
LILAHGNGIA TEMANVANEL LGMHEVTGID MPLHESPKSF LERVKVYMRT LEHINGLLLL
VDMGSLAYIG DILETEFQIP VRVLSMTSTP HVLEAARKAQ LGYSLDALYE TVKNLTPFYL
HVHEEKKKPL SPMKSVILTA CLTGEGSALA IQKMLENYLR FDKNLIEIIP ISIVHQKDLT
KMLENIKKER NIICIVTNFD VQVPCLTYHF QDIVNYKAIQ PIQELITYEE TYAKMADILG
QQMQRDDGAL MIKTIRYTLN TIQELTSLQL NPDSLMGVIL HMSCMIDRLQ KGESLLPYPD
RETRRQDQYW MYMKVKKALQ PIENTFTVNI PDDEVFYVMD FFIKNQPQKD HETNESP
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