Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3676 |
Symbol | |
ID | 5347366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3735883 |
End bp | 3736575 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640841171 |
Product | LrgB family protein |
Protein accession | YP_001376868 |
Protein GI | 152977351 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000265737 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTA TATTAATCGG GATTGGTTGG GTTCTTCTGA CAGTGTTCAT ATATCAATTA TCTAAAATGA TTTATAAGAT ATTGCCAACG CCGTTTACGA TTCCAATGAT TATCGCAACA GTACTCATGA TTATTTTATT AATGATGTTG GATGTACCGT ATCAACAATA CATGCAAAGT GGCGGGGGCT GGATTTCTAA ATTACTTGGA CCAGGTGTTG TAGCATTTGC AATTCCGCTC TATAAACAGC GCCATGTACT TCGAAAATAT GTTGTGCCGA TTGCTGGTGG TGTTATTGTG GGAACAACGG TTGCGATTGC AAGTGACTTT ATTATTGCGT CGCTGATGGG AACAGATAAA AGTTTAATTT TATCTTCTTT ACCAAAATCA GTAACAATGC CAGTTGCTAT GAGCGTATCA GAACAAGTTG GTGGTGTGCC ATCATTAACA GCAGCGTTCG TTGTTGTTGC TGGAATCAGT GGGACGATTA CAGGGCCTTT TTTATTGAAA TGGAGCCGTG TGACAAATTC GGTTGGTAAA GGAATTGGAT TTGGCTGTGC TTCACATATT ATGGGCGTTA TGAGAGCGAT GAAAAATAAT GAGAGTGAAG GTGTTATTGG ATCGGTAACA ATGACATTAA CGGCTATTTT AACGTGCTTA CTGGGACCTT TATTTGCAAT GATGCTTGTA TAA
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Protein sequence | MSSILIGIGW VLLTVFIYQL SKMIYKILPT PFTIPMIIAT VLMIILLMML DVPYQQYMQS GGGWISKLLG PGVVAFAIPL YKQRHVLRKY VVPIAGGVIV GTTVAIASDF IIASLMGTDK SLILSSLPKS VTMPVAMSVS EQVGGVPSLT AAFVVVAGIS GTITGPFLLK WSRVTNSVGK GIGFGCASHI MGVMRAMKNN ESEGVIGSVT MTLTAILTCL LGPLFAMMLV
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