Gene Bcer98_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3545 
SymboldapF 
ID5343491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3611138 
End bp3612004 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content39% 
IMG OID640841046 
Productdiaminopimelate epimerase 
Protein accessionYP_001376744 
Protein GI152977227 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAT TTTCTTTTAC AAAAATGCAT GGTCTTGGAA ATAGCTATAT ATATGTAAAT 
ATGTTTGAAG AACATATTCC AGAGGAAGAA CTAGCTCTTG TAGCAGAGAA AGTTTCGAAC
AGAAATACCG GCATTGGGGC TGATGGAATG ATTTTAATTT GTCCATCTGA AGTAGCACCA
GTAAAAATGC GTATGTTTAA TAATGATGGC TCAGAGGGAA AGAGTTGTGG AAATGGGCTT
CGCTGTGTAG CGAAATATGC ATATGAGCAT AAATTAGTAG AAGAAACGAT TTTTACGATT
GAAACATTAG CTGGTATTGT AACAGCTGAG GTAACAGTCG AGAATGATAT TGTTACACTC
GTTAAAATTG ATATGGGGGC ACCTCGTTTA ACACGTGCGG AGTTACCGAT GCTTGGAGAA
GGAGAAACGC CGTTTATTCG TGAGGACTTT CTATTTCATA ATCAACGTTA TGCATTTACA
GCAGTTTCTA TGGGAAATCC ACATGCTGTA ATTTTTGTTG ATGATGTAGA AAAGGCACCT
CTTACAACAC TGGGACCTGT ACTTGAGAAT CATGAAATGT TTCCAGAACG GGTAAATGTT
GAGTTCATTG AAATTTTGAA TGAAACAGAG ATGAATTTCC GCGTATGGGA ACGTGGATCA
GGTGTAACGC AAGCATGTGG AACGGGAGCG TGTGCATCTG TTGTAGCAGC AATCTTAAAT
GGAAAAATGG AGCGCGGTAA AGAAATTACG GTTCATTTAG CTGGCGGTGA CTTAATGATT
ACGTGGACAG AAGAAGGAAC TGTAATGATG AAAGGACCAG CAGAAGTGAT TTGTCACGGA
GTGTATGAGT ACAAGATAGA AGCATAA
 
Protein sequence
MSQFSFTKMH GLGNSYIYVN MFEEHIPEEE LALVAEKVSN RNTGIGADGM ILICPSEVAP 
VKMRMFNNDG SEGKSCGNGL RCVAKYAYEH KLVEETIFTI ETLAGIVTAE VTVENDIVTL
VKIDMGAPRL TRAELPMLGE GETPFIREDF LFHNQRYAFT AVSMGNPHAV IFVDDVEKAP
LTTLGPVLEN HEMFPERVNV EFIEILNETE MNFRVWERGS GVTQACGTGA CASVVAAILN
GKMERGKEIT VHLAGGDLMI TWTEEGTVMM KGPAEVICHG VYEYKIEA