Gene Bcer98_3327 details

Gene Information

• Locus tag: Bcer98_3327
• Symbol: rpsD
• ID: 5346651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cytotoxicus NVH 391-98
• Kingdom: Bacteria
• Replicon accession: NC_009674
• Strand: +
• Start bp: 3398133
• End bp: 3398735
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640840816
• Product: 30S ribosomal protein S4
• Protein accession: YP_001376539
• Protein GI: 152977022
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000248743
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTT ATACAGGTCC AGCTTGGAAA CTGTCTCGTC GTCTTGGTAT CTCTCTAAGC 
GGCACAGGTA AAGAATTAGA AAAACGCCCT TACGCACCAG GTCCTCACGG TCCTAACCAA 
CGTAAGAAAC TTTCTGAATA CGGTTTACAA TTACAAGAAA AACAAAAACT TCGTCACATG 
TACGGCATGA CTGAACGTCA ATTCCGTCGC ACATTTGACC AAGCAGGTAA AATGCCAGGT 
AAACACGGCG AAAACTTCAT GATCCTTCTT GAAGCTCGTC TTGACAACCT AGTTTACCGC 
ATGGGCTTAG CTCGCACTCG TCGCGCAGCT CGCCAATTAG TAAACCACGG TCACATCATG 
GTAGATGGCG CTCGCGTAGA TATCCCATCT TACCGCGTGA AACCAGGTCA AACAATCAGC 
GTTCGCGAAA AATCTCGCAA CCTAGCTGTA ATTAAAGAAG CTATGGAAGT TAACAACTTC 
GTACCAGAAT ACTTAACTTT CGATGCTGAC AAATTAGAAG CTACTTTCAC TCGTCACGCT 
GAGCGTGCTG AGTTACCAGC TGAAATCAAC GAAGCGTTAA TCGTAGAGTT CTACTCTCGT 
TAA 

 

Protein sequence

MARYTGPAWK LSRRLGISLS GTGKELEKRP YAPGPHGPNQ RKKLSEYGLQ LQEKQKLRHM 
YGMTERQFRR TFDQAGKMPG KHGENFMILL EARLDNLVYR MGLARTRRAA RQLVNHGHIM 
VDGARVDIPS YRVKPGQTIS VREKSRNLAV IKEAMEVNNF VPEYLTFDAD KLEATFTRHA 
ERAELPAEIN EALIVEFYSR