Gene Bcer98_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3254 
Symbol 
ID5345434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3320209 
End bp3321948 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content36% 
IMG OID640840745 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001376468 
Protein GI152976951 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAT CTTTAATAGT AGGATATGCT ATATTTTGTA TTATAGTCTT CTTCCTGGTA 
AATCGTCTTT TTAGAAAGAA AAAAACAAAC GCGGGAGAAG AGAAGGTCCC AGCCGTAAGT
AAAATAGAAA CGAAGCAACC GGAACAAAAA GCTTCCAATC TTGTAGAATT AGAAGCAGCT
AAGAAAGAAG TACCCAAAAA GCATTTGCCA ATAGAAAATG TAAATGTAAA AGCAGTTGTG
ACAGTATTGA TTCTTGGCAT GTTTGTTTCG ATTTTAAACC AAACGATTAT TAATGTTGCT
TTGCCACCAT TAATGAATGA ATTTAATGTC TCAACTTCAA CAGCGCAATG GTTAATTACA
GGATTTATGC TTGTAAACGG GATTTTAGTC CCAATCAGTG CCTTTTTAGT ATCGCGCTTT
ACGTATCGTA ATTTATTTAT AGCAGCAATG GTATTTTTTA CAGTAGGTTC TATTATTTGT
GCTATATCTG GAAACTTTAC GATGATGATG ATAGGCCGTG TAATTCAAGC AGTTGGTGCA
GGTGTTTTAA TGCCAATTGG TATGAATATT TTTATGACAC TGTTCCCTCC CCATAAGCGA
GGAGCTGCGA TGGGATTATT AGGGGTAGCG ATGATTTTAG CACCAGCTAT TGGACCGACT
GTAACAGGTT GGGTCATTGA AAATTACAGC TGGAACTTAA TGTTCTATGT GATGTTTGTG
ATTGGCCTAA TCATTACTTT ATTATCATTA AAATTCTTTA CACTAGCACA GCCAGTATCG
AAAGCGAAAT TGGATTTATT TGGTGTAATT AGCTCAAGTA TTGGACTTGG TAGCTTATTA
TATGGATTTA GTGAAGCCGG CAATAATAGT TGGAGCAGTA CAGAAGTTGT TGTTTCTCTG
ATCATCGGTA CAATTGGTCT TGCATTGTTT ATTTGGAGAG AAATGACGAC GGATAATAAA
ATGTTGGATT TACATGTATT TAAGTATCCA ACATTTACTT TCACATTGTT AATTAACGCA
ATTGTAACAA TGGCGCTATT TGGAGGTATG TTATTACTTC CTGTCTATCT GCAAAATATT
CGTGGTTTTA CGCCAATTGA ATCCGGTCTA CTGCTTCTTC CAGGATCATT AATTATGGGG
ATTATGGGAC CGATTGCAGG GAAACTATTT GATAAGTATG GCATTCGTCC CTTAGCAATC
ATTGGGTTAG CAATTACAAC ATATGCAACA TATGAATTTA CGAAATTAAC AATGGAGACA
CCATATAGTG TAATCATGAG AGACTACATC ATACGTTCAA TCGGAATGTC GTTTATTATG
ATGCCAATTA TGACAGCTGG TATGAATGCG TTGCCGATGA AATTGATTTC GCATGGTACA
GCAACACAAA ATACGTCAAG ACAAGTCGCC GGTTCAATTG GTACAGCGAT TTTAATTACA
ATTATGACGC AGCAAACAAA CTATCACGTA GCAGATTACG GAAATATGTT AACAACGACA
AATCCGATTT TAGTTGATAA AGTACACGGA ATGGGACAAA GCTTAGCAGC TTTAGCTGGT
TCCGCACAAG CTGGAGATGT GATGAGTACG CAACTATTAT ACGGACAAAT TTCAAAGCTA
TCTGCAATTA ACGGTATTAA TGATGCGTTC TTAATTGCAA CCATATTAGC GGGTATTGCC
TGGGTATTAT CATTCTTCTT GAAATCAGGT AATAAGCCAA ATCGAAAAGC AGGGAATTAA
 
Protein sequence
MSSSLIVGYA IFCIIVFFLV NRLFRKKKTN AGEEKVPAVS KIETKQPEQK ASNLVELEAA 
KKEVPKKHLP IENVNVKAVV TVLILGMFVS ILNQTIINVA LPPLMNEFNV STSTAQWLIT
GFMLVNGILV PISAFLVSRF TYRNLFIAAM VFFTVGSIIC AISGNFTMMM IGRVIQAVGA
GVLMPIGMNI FMTLFPPHKR GAAMGLLGVA MILAPAIGPT VTGWVIENYS WNLMFYVMFV
IGLIITLLSL KFFTLAQPVS KAKLDLFGVI SSSIGLGSLL YGFSEAGNNS WSSTEVVVSL
IIGTIGLALF IWREMTTDNK MLDLHVFKYP TFTFTLLINA IVTMALFGGM LLLPVYLQNI
RGFTPIESGL LLLPGSLIMG IMGPIAGKLF DKYGIRPLAI IGLAITTYAT YEFTKLTMET
PYSVIMRDYI IRSIGMSFIM MPIMTAGMNA LPMKLISHGT ATQNTSRQVA GSIGTAILIT
IMTQQTNYHV ADYGNMLTTT NPILVDKVHG MGQSLAALAG SAQAGDVMST QLLYGQISKL
SAINGINDAF LIATILAGIA WVLSFFLKSG NKPNRKAGN