Gene Bcer98_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3123 
Symbol 
ID5345339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3168064 
End bp3170247 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content38% 
IMG OID640840617 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_001376342 
Protein GI152976825 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00942759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATG AGCAAGTACT AACAGCCGAA CAGGTACTCG AAAAAGCGGG ACAATATTTA 
GCGGACGATG ATATAGAACT GGTGGCGCGT GCCTATGAAT ATGCACGTGA TGCACATAGC
GAACAGTATA GAAAATCGGG CGAACCATAT ATTATTCATC CGATTCAAGT TGCAGGTATT
TTAGTTGATT TACACATGGA TCCCTCTACA GTATCAGCTG GATTTTTACA TGATGTAGTA
GAAGATACAG AAGTTACATT AGAGGATATT GAACGGGAAT TTAGTAAAGA AATTGCAATG
CTTGTTGATG GTGTTACAAA ACTTGGGAAA ATTAAATATA AGTCTCATGA ACAGCAACAG
GCAGAGAACC ATCGCAAAAT GTTTATTGCA ATGGCGCAAG ATATTCGTGT CATTTTAATT
AAATTAGCTG ACCGGCTTCA TAATATGCGT ACGCTTAAGC ATTTGCCTCA AGAAAAGCAG
CGTCGCATTG CAAATGAAAC GTTAGAAATT TTTGCACCTT TAGCACATAG GCTCGGAATC
AATACGATTA AATGGGAGCT TGAAGATACA TCACTTCGTT ATTTAAATCC ACAACAATAT
TATCGTATTG TGAATTTGAT GAAGCGAAAA CGCGCGGAAC GTGAAGAATA TTTAGATGAG
GTTATGACAA GTATTCAAGA GAAATTAAAT GAGGTTTCTA TTCATCCAGA TATTTCAGGA
AGACCGAAAC ATATTTATAG CATTTATCGT AAAATGGCAC TTCAAAATAA ACAGTTTAAT
GAAATTTATG ATTTGTTAGC TGTGCGTGTT GTTGTCAATA GTATTAAGGA TTGCTATGCG
GTATTAGGAA TTATTCATAC GTGCTGGAAA CCGATGCCAG GACGTTTTAA AGATTATATC
GCAATGCCAA AAGCAAACCT ATATCAATCG TTGCATACAA CTGTCATCGG TCCAAAGGGC
GATCCACTTG AAGTGCAAAT TCGTACGAAG GAAATGCATG AAATTGCTGA ATATGGAATT
GCGGCACACT GGGCATATAA AGAAGGAAAA GCAGCAGCGA CAGGAACGCT TGAGAAAAAA
TTAACATGGT TTAGACAAAT ATTAGAATGG CAAAACGAAG CTTCTAATGC GGAAGAGTTT
ATGGAGTCAT TAAAGATTGA TTTATTTTCC GATATGGTGT TTGTCTTTAC ACCAAAAGGT
GATGTAATGG AATTGCCAAT GGGTTCGGTT CCAATTGATT TTGCATACCG TGTTCATTCA
GAAATCGGTA ATAAGACCAT TGGCGCAAAA GTAAATGGTA AAATGGTCAC TCTTGATTAT
AAGTTAAAAA CAGGTGACAT TATTGAAATT TTAACCTCTA AACATTCATA TGGACCAAGT
CAAGATTGGG TAAAACTTGC ACAAACTTCT CATGCGAAAA ATAAGATTCG TCAATTTTTC
AAAAAGCAAC GTCGTGAAGA GAATATTGAC AAAGGACGCG AACTTGTTGA AAAAGAAGTG
CGTAGCTCAG AGTTTGAAAT GAAAGAAGTA CTCGCACCAG ATAATTTAAA ACGCGTTGCG
GAGAAATTTA ATTTTGCTAA TGAAGAAGAT ATGTTTGTAG CGGTAGGATA CAACGGGATT
ACAGCTGCGC AAATTGTAAC GCGATTAACG GACAAGTTCC GCAAACAACG TGAAGAAGAG
CAAGATATTG TTGAGGTTAA AGAAGTTCGT AAACCAATGA AAATTCGAAA ATGGGACTCT
GGTGTAAAAG TAAGTGGTGC AGATAATTTA TTAATTCGTT TATCAAAATG TTGTAACCCA
GTTCCCGGTG ACGATATTAT CGGATATATT ACGAAAGGCC GCGGTGTCTC TATTCATCGT
CGTGACTGCG TGAATGTGCA CACGGAAGAA GCGAAAGAGC GTTTATTAGA GGTCGAGTGG
GAAGGTAGCC CTGAAAAAGA AATTGAGTAT AATGTTGATA TTGAAATTTC TGGTTACGAT
CGTCGCGGCT TGTTAAATGA GGTGCTACAA GCTGTTACAG AGACGAAAAC TTACATTTCG
GCTGTTTCGG GTCGAAGTGA CCGCAATAAA ATGGCAACCA TTAACATGTC GATTTCCATT
CGTAACTTAC AACATTTGAA AAAGGTAGTA GAGCGTATTA AACAAGTTCC AGAAATTTAT
GCAGTACGCC GTATGATGCA TTAA
 
Protein sequence
MANEQVLTAE QVLEKAGQYL ADDDIELVAR AYEYARDAHS EQYRKSGEPY IIHPIQVAGI 
LVDLHMDPST VSAGFLHDVV EDTEVTLEDI EREFSKEIAM LVDGVTKLGK IKYKSHEQQQ
AENHRKMFIA MAQDIRVILI KLADRLHNMR TLKHLPQEKQ RRIANETLEI FAPLAHRLGI
NTIKWELEDT SLRYLNPQQY YRIVNLMKRK RAEREEYLDE VMTSIQEKLN EVSIHPDISG
RPKHIYSIYR KMALQNKQFN EIYDLLAVRV VVNSIKDCYA VLGIIHTCWK PMPGRFKDYI
AMPKANLYQS LHTTVIGPKG DPLEVQIRTK EMHEIAEYGI AAHWAYKEGK AAATGTLEKK
LTWFRQILEW QNEASNAEEF MESLKIDLFS DMVFVFTPKG DVMELPMGSV PIDFAYRVHS
EIGNKTIGAK VNGKMVTLDY KLKTGDIIEI LTSKHSYGPS QDWVKLAQTS HAKNKIRQFF
KKQRREENID KGRELVEKEV RSSEFEMKEV LAPDNLKRVA EKFNFANEED MFVAVGYNGI
TAAQIVTRLT DKFRKQREEE QDIVEVKEVR KPMKIRKWDS GVKVSGADNL LIRLSKCCNP
VPGDDIIGYI TKGRGVSIHR RDCVNVHTEE AKERLLEVEW EGSPEKEIEY NVDIEISGYD
RRGLLNEVLQ AVTETKTYIS AVSGRSDRNK MATINMSISI RNLQHLKKVV ERIKQVPEIY
AVRRMMH