| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_3115 |
|---|
| Symbol | |
|---|
| ID | 5345761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | + |
|---|
| Start bp | 3159455 |
|---|
| End bp | 3160693 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640840609 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001376334 |
|---|
| Protein GI | 152976817 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAT CAATCAATCT AGTCGATATA GAATACACTT GCAATGTATT TTTTCAATCT
TTCAAAATCC CAGTTTGTTT TTTAGATACT AACAAAAATA TTCTTCGTAA ATTTACATCA
CAAAATCTTT CTAACCCTCT CTATACCTCA AAGGAGGAAG AATTATATAC ACTTTATCAG
AAAGGTGATC CATATAATGT TCCTATCTTC AGAACCACTC AATATCTAGA GCATTTCATT
TTAATTCACA TAAGGAACGA TTACATAGTT AATGGTACGG TTATTATTGG CCCTGCAACG
CATATACATT TTTCAGACGA GATAATTGAC AACATGCTAA AAGATTTGAA TTCCTCTACA
AGTCCCAAAA AATTAAAGAA CTACTTTCTT TCATTACCAG TCAAAGATAA ATGGTTCTTA
GTGAATATAG CATGTCTATG TTATAACTTA ATCTATAAAA AGAGATTAGA TACAAATACC
TTTTTAAATA AGAACAACTC ACTTGATGAG ATAAATACAA ATATCTTCAA TAAATATTCA
TATATTCCAA TAAAAAAGAT GACTGAATCT ATTAATTTTA ATTTTTCATT AGAACAACGA
TTACTTGTGG CTATCAAAGA TGGGGATAAA GAATCATGTC TCAAATATTA TGATGCATAT
TCACAAGAAA CAATTAAATC CATGTCTTCA CTTAATCAGT TGCGATACCA AAAAAATAAA
GGGATTTCTT CCATCACACT TGTTGCTAAA TATGCGATAA AGGGTGGTCT TCCTTCTGGA
ATCGCTCGTA CACTTGGTGA GATGTATATA CAAAATATCG AAAAATCAAA AGATATAAAA
ACCATTGATA AATTGCTAAA AGTTGCTCTG TGTACATTTG CAGATCGTGT AAAGGAACAT
AAAGCGCAGC ACCATTCAAA AGCTATCACT ACTTGTCAAA ACTATATTTT TAAAAATATT
TACCAAAAAA TATCTGTTAA GCAACTTGCT CGTATGGTCA ATATGAATCC AAATTACTTA
TCTATATTAT TCAAAGAAGA AGTCGGAATC TCATTAAATG AATATATTCA ACGCGAGCGC
GTAGAAGAAG CAAAAAAATT ACTAACTTTA ACGGATTATT CTTTATCCGA CATTTGTGCT
TGGCTCAATT TTAGTGACCA AAGCTACTTT ACTAAAGTTT TTAAAAAGTT CACTAATAAA
ACACCTGGAA AATATCGAAA ACACTTCACC ATAATATAA
|
|---|
| Protein sequence | MTKSINLVDI EYTCNVFFQS FKIPVCFLDT NKNILRKFTS QNLSNPLYTS KEEELYTLYQ
KGDPYNVPIF RTTQYLEHFI LIHIRNDYIV NGTVIIGPAT HIHFSDEIID NMLKDLNSST
SPKKLKNYFL SLPVKDKWFL VNIACLCYNL IYKKRLDTNT FLNKNNSLDE INTNIFNKYS
YIPIKKMTES INFNFSLEQR LLVAIKDGDK ESCLKYYDAY SQETIKSMSS LNQLRYQKNK
GISSITLVAK YAIKGGLPSG IARTLGEMYI QNIEKSKDIK TIDKLLKVAL CTFADRVKEH
KAQHHSKAIT TCQNYIFKNI YQKISVKQLA RMVNMNPNYL SILFKEEVGI SLNEYIQRER
VEEAKKLLTL TDYSLSDICA WLNFSDQSYF TKVFKKFTNK TPGKYRKHFT II
|
|---|
| |