| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_3060 |
|---|
| Symbol | aroE |
|---|
| ID | 5346628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 3105557 |
|---|
| End bp | 3106390 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640840556 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_001376281 |
|---|
| Protein GI | 152976764 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.445957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAT TATATGGTGT AATCGGAAAT CCAATTGGAC ATTCCTTATC ACCGCTTATG
CATAATGATG CGTTTGAACA TTTAGGAATA GATGCTCATT ATCATGCGTT TCTTGTAGAA
GAAGAGATGC TAGGGGAAGC TGTGAAAGGG TTAAAGGCGT TAGGAGTTTC AGGGATCAAT
GTAACGACTC CACATAAAGT TGCTATTATG AAATATTTAG ATGAAATCGA TCCGTTAGCA
AAGCAAATCG GTGCAGTAAA TACTGTTGTT CATCGAAACG GCAAGCTTGT TGGTTATAAT
ACAGATGGAA TTGGGTATGT TCGTTCTTTG CAGGCTATTA GTAAAGAACC CTTACGTCAC
AAACGTATGT TATTACTCGG TGCAGGTGGT GCATGTCGTG CTATTTATTG TTCGCTAGTA
GCTGCAGGAG TAAAAGAAAT CGATATTGCC AACCGGACGG TAGAAACAGC AAAGCAGTTG
ATTGCAAGTA GCAAAGAACG GGTTGTTTCA AAGGCGCTTT CACTAGAGAA AGCGACGGAA
GCACAAGAGA ATTATGATGT GCTGATTCAA ACGACAACGA TAGGTATGCA TCCACATGTA
CAACATACGC CAATGCAAAT TGGCTCTTTA AAACAAGGGG CAATTGTTTC TGATATTATT
TATAATCCTT TTGAAACGAA GTTCTTACAT GATGCAAAAT TGAGTGGAGC GATTGTTCAA
AACGGTATTG ATATGTTTGT TTATCAAGGG GCACTTGCCT TTGAGATGTG GACTGGAATG
ATGCCAGACA TTAATAGAAT GAAACAATTA GTAATAAGAA AGCTTGGAGG ATAA
|
|---|
| Protein sequence | MKQLYGVIGN PIGHSLSPLM HNDAFEHLGI DAHYHAFLVE EEMLGEAVKG LKALGVSGIN
VTTPHKVAIM KYLDEIDPLA KQIGAVNTVV HRNGKLVGYN TDGIGYVRSL QAISKEPLRH
KRMLLLGAGG ACRAIYCSLV AAGVKEIDIA NRTVETAKQL IASSKERVVS KALSLEKATE
AQENYDVLIQ TTTIGMHPHV QHTPMQIGSL KQGAIVSDII YNPFETKFLH DAKLSGAIVQ
NGIDMFVYQG ALAFEMWTGM MPDINRMKQL VIRKLGG
|
|---|
| |